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Putative Paracoccus pantotrophus DSM 2944 RM systems
Ref: Bockwoldt,J.A. et al. unpublished
REBASE ref # 29916
Sequence length: | GenBank #: | |
chromosome 1: | 2,248,278 bp | CP044426 |
chromosome 2: | 1,525,820 bp | CP044423 |
plasmid pPAN1: | 99,949 bp | CP044424 |
plasmid pPAN2: | 535,332 bp | CP044425 |
REBASE acronym: Ppa2944
Org_num: 38458
All begin ESD82_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid pPAN1 | ||||
7770 | ISL3 family transposase | |||
7775 | R | Bmu503ORF29405P (97% identity) | Ppa2944ORF7795P | |
7780 | 125 aa hypothetical protein | |||
??? | S | S2.AspSHORF13005P (44% identity) | S.Ppa2944ORF7795P | |
7790 | DUF262 domain-containing protein | |||
7795 | M | M.Bmu503ORF29405P (94% identity) | M.Ppa2944ORF7795P | |
7800 | 81 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
17470 | alkane 1-monooxygenase | |||
17475 | M | M.Ppa11072ORF10010P (99% identity) | M.Ppa2944ORF17475P | |
17480 | ribonuclease HII | |||
18645 | 716 aa hypothetical protein | |||
18650 | M | M.PdeR1ORF9295P (62% identity) | M.Ppa2944ORF18650P | |
18655 | 96 aa hypothetical protein | |||
20080 | DNA polymerase III subunit beta | |||
20085 | M | M2.Ppa2944ORF3635P (98% identity) | M.Ppa2944ORF20085P | |
20090 | 142 aa hypothetical protein | |||
20875 | 72 aa hypothetical protein | |||
20880 | M | M.Pfe100066ORF3315P (93% identity) | M.Ppa2944ORF20880P | |
20885 | HNH endonuclease | |||
chromosome 2 | ||||
3630 | 115 aa hypothetical protein | |||
3635 | M | M.Ppa10489ORF17270P (91% identity) | M1.Ppa2944ORF3635P | |
3640 | 113 aa hypothetical protein | |||
3645 | 139 aa hypothetical protein | |||
3650 | M | M.Ppa2944ORF20085P (98% identity) | M2.Ppa2944ORF3635P | |
3655 | DNA polymerase III subunit beta | |||
plasmid pPAN2 | ||||
8280 | recombinase family protein | |||
8285 | M | M.Psa18447ORF10570P (34% identity) | M.Ppa2944ORF8285P | |
8290 | 259 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
20795 | WYL domain-containing protein | |||
20800 | M | M.Ssp067ORF5745P (69% identity) | M.Ppa2944ORF20800P | |
20805 | hydrolase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
20955 | Fic family protein | |||
20960 | R | Pfe100066McrBP (61% identity) | Ppa2944McrBP | |
20965 | R | Rth16684McrCP (95% identity) | Ppa2944McrCP | |
20980 | uncharacterized protein |