Xanthomonas campestris pv. campestris MAFF302021 |
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Putative Xanthomonas campestris pv. campestris MAFF302021 RM systems
Ref: Takeuchi,K. and Mitsuhara,I. unpublished
REBASE ref # 29522
Complete sequence: 5,048,651 bp
GenBank #: AP019684
REBASE acronym: Xca2021
Org_num: 37359
All begin Xcc3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12430 | metal-dependent hydrolase | |||
| 12440 | R | XcaCN13ORFCP (95% identity) | CAAGNNNNNCTTA | Xca2021ORF12470P |
| 12450 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S.Xca2021ORF12470P |
| 12460 | DNA-damage-inducible protein D | |||
| ??? | M | M.Xcacc2ORF6130P (99% identity) | CAAGNNNNNCTTA | M.Xca2021ORF12470P |
| 12490 | 198 aa hypothetical protein | |||
| 32270 | 98 aa hypothetical protein | |||
| 32280 | R | XcaYORFFP (99% identity) | Xca2021ORF32310P | |
| 32290 | S | S.XcaJXORFGP (100% identity) | S.Xca2021ORF32310P | |
| 32300 | DNA-binding protein | |||
| 32310 | M | M.XcaYORFFP (99% identity) | M.Xca2021ORF32310P | |
| 32320 | 296 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6110 | IS1404 transposase | |||
| 6120 | R | XcaYORFAP (100% identity) | Xca2021ORF6120P | |
| 6130 | 90 aa hypothetical protein | |||
| 20850 | transposase | |||
| 20860 | RM | XcaYORFDP (98% identity) | Xca2021ORF20860P | |
| 20870 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32310 | DNA methyltransferase | |||
| 32320 | R | XcaYMrrP (100% identity) | Xca2021MrrP | |
| 32330 | plasmid stabilization protein | |||