Xanthomonas hortorum VT106 |
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Putative Xanthomonas hortorum VT106 RM systems
Ref: Xu,D. et al. unpublished
REBASE ref # 29524
Complete sequence: 5,101,806 bp
GenBank #: CP031607
REBASE acronym: XhoVT106
Org_num: 37364
All begin DYQ48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16090 | 98 aa hypothetical protein | |||
| 16095 | R | Xho498ORF20150P (100% identity) | XhoVT106ORF16110P | |
| 16100 | 195 aa hypothetical protein | |||
| ??? | S | S.Xho498ORF20150P (100% identity) | S.XhoVT106ORF16110P | |
| 16105 | hydroxyacid dehydrogenase | |||
| 16110 | M | M.Xho9ORF16935P (100% identity) | M.XhoVT106ORF16110P | |
| 16115 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1765 | 0 aa hypothetical protein | |||
| 1770 | M | M.Xho9ORF20400P (100% identity) | M.XhoVT106ORF1770P | |
| 1775 | R | Xho498ORF3960P (100% identity) | XhoVT106ORF1770P | |
| 1780 | IS1595 family transposase | |||
| 3335 | 276 aa hypothetical protein | |||
| 3340 | M | M.Xho9ORF12955P (100% identity) | M.XhoVT106ORF3340P | |
| 3345 | V | V.Xho7ORFAP (100% identity) | V.XhoVT106ORF3340P | |
| 3350 | IS30 family transposase | |||
| 6335 | DEAD/DEAH box helicase | |||
| 6340 | M | M.Xho9ORF8255P (100% identity) | M.XhoVT106ORF6340P | |
| 6345 | 72 aa hypothetical protein | |||
| 16400 | Abi family protein | |||
| 16405 | R | Xtr18974ORF3219P (66% identity) | XhoVT106ORF16420BP | |
| 16410 | IS3 family transposase | |||
| 16415 | R | Xtr18974ORF3219P (33% identity) | XhoVT106ORF16420AP | |
| 16420 | M | M.XmaII (94% identity) | M.XhoVT106ORF16420P | |
| 16425 | 80 aa hypothetical protein | |||
| 16660 | 245 aa hypothetical protein | |||
| 16665 | M | M.Xho9ORF9360P (100% identity) | M.XhoVT106ORF16665P | |
| 16675 | phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17415 | integrase | |||
| 17420 | R | AfeMOR02ORF1340P (82% identity) | XhoVT106ORF17425P | |
| 17425 | M | M.Esp994ORF2680P (67% identity) | M.XhoVT106ORF17425P | |
| 17430 | DUF2130 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16110 | SAM-dependent DNA methyltransferase | |||
| 16115 | R | Xho9Mrr2P (100% identity) | XhoVT106MrrP | |
| 16120 | type II toxin-antitoxin system RelE/ParE family | |||