Aliivibrio wodanis 06/09/160 |
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Putative Aliivibrio wodanis 06/09/160 RM systems
Ref: Hjerde,E. unpublished
REBASE ref # 18377
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,108,220 bp | LR721750 |
| chromosome 2: | 1,591,039 bp | LR721751 |
| plasmid pAWOD_2: | 194,173 bp | LR721753 |
REBASE acronym: Awo160
Org_num: 37527
All begin AW0309160_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1233 | 116 aa hypothetical protein | |||
| 1234 | M | M.AsaLFORF1792P (97% identity) | M.Awo160ORF1234P | |
| 1235 | S | S1.Ifl194ORF20490P (39% identity) | S.Awo160ORF1234P | |
| 1236 | DNA replication and repair protein RecF | |||
| 1237 | 245 aa hypothetical protein | |||
| 1238 | R | AwoDORF1175P (98% identity) | Awo160ORF1234P | |
| 1239 | 236 aa hypothetical protein | |||
| 1579 | 5-methylcytosine-specific restriction enzyme B | |||
| 1580 | R | EcoNT1W22ORFAP (72% identity) | Awo160ORF1582P | |
| 1581 | S | S.HalFB1ORF19450P (38% identity) | S.Awo160ORF1582P | |
| 1582 | M | M.Val1831ORF2285P (82% identity) | M.Awo160ORF1582P | |
| 1583 | 281 aa hypothetical protein | |||
| chromosome 2 | ||||
| 3831 | 5-methylcytosine-specific restriction enzyme B | |||
| 3832 | S | S.Vsp43009ORF10120P (56% identity) | S.Awo160ORF3833P | |
| 3833 | M | M.Afi5LCORFAP (90% identity) | M.Awo160ORF3833P | |
| 3834 | R | Afi5LCORFAP (86% identity) | Awo160ORF3833P | |
| 3835 | 668 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 320 | Cell division protein DamX | |||
| 321 | M | M.AwoDDamP (99% identity) | M.Awo160DamP | |
| 322 | Ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 3469 | Tyrosine recombinase XerD | |||
| 3470 | M | M.AsaLFORF503P (96% identity) | M.Awo160ORF3470P | |
| 3471 | 1000 aa hypothetical protein | |||
| plasmid pAWOD_2 | ||||
| 4559 | 35 aa hypothetical protein | |||
| 4560 | M | M.Vdi6027FDndBP (86% identity) | M.Awo160DndBP | |
| 4561 | 544 aa hypothetical protein | |||
| 4560 | 359 aa hypothetical protein | |||
| 4561 | M | M.Vez21522DndCP (85% identity) | M.Awo160DndCP | |
| 4562 | DNA replication and repair protein RecF | |||
| 4561 | 544 aa hypothetical protein | |||
| 4562 | M | M.Toc189DndDP (55% identity) | M.Awo160DndDP | |
| 4563 | 117 aa hypothetical protein | |||
| 4562 | DNA replication and repair protein RecF | |||
| 4563 | M | M.Vpa9027DndEP (86% identity) | M.Awo160DndEP | |
| 4564 | 426 aa hypothetical protein | |||
| 4565 | 239 aa hypothetical protein | |||
| 4566 | R | Toc189DptH2P (72% identity) | Awo160DptHP | |
| 4567 | 445 aa hypothetical protein | |||
| 4566 | 1729 aa hypothetical protein | |||
| 4567 | R | VspF190cDptGP (72% identity) | Awo160DptGP | |
| 4568 | 532 aa hypothetical protein | |||
| 4567 | 445 aa hypothetical protein | |||
| 4568 | R | PspHJ039DptFP (57% identity) | Awo160DptFP | |
| 4569 | 69 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1577 | Nicotinamide riboside transporter PnuC | |||
| 1578 | R | Afi507McrCP (93% identity) | Awo160McrCP | |
| 1579 | R | Afi507McrBP (42% identity) | Awo160McrBP | |
| 1580 | Type-1 restriction enzyme R protein | |||
| chromosome 2 | ||||
| 3829 | 1119 aa hypothetical protein | |||
| 3830 | R | Vto7225aMcrCP (64% identity) | Awo160McrC2P | |
| 3831 | R | Vga7244McrBP (82% identity) | Awo160McrB2P | |
| 3832 | Type-1 restriction enzyme EcoKI specificity | |||