Escherichia coli O145:H28 122715 |
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Putative Escherichia coli O145:H28 122715 RM systems
Ref: Nakamura,K. et al. unpublished
REBASE ref # 29325
| Sequence length: | GenBank #: | |
| Chromosome: | 5,418,961 bp | AP019708 |
| plasmid pO145_122715_1: | 86,874 bp | AP019709 |
| plasmid pO145_122715_2: | 48,572 bp | AP019710 |
REBASE acronym: Eco122715
Org_num: 36763
All begin EC122715_, EC122715_p1-, EC122715_p2-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2275 | metal-dependent hydrolase | |||
| 2276 | R | EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | Eco122715ORF2280P |
| 2277 | 620 aa hypothetical protein | |||
| 2278 | SEC-C family protein | |||
| 2279 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco122715ORF2280P |
| 2280 | M | M.Eco112648ORF2474P (100% identity) | GATGNNNNNNTAC | M.Eco122715ORF2280P |
| 2281 | IS629 transposase OrfA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 759 | NinF protein | |||
| 760 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco122715ORF760P |
| 761 | NinB family protein | |||
| 2384 | amino acid exporter for phenylalanine | |||
| 2385 | V | V.SsoSE61DcmP (100% identity) | V.Eco122715DcmP | |
| 2386 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco122715DcmP |
| 2387 | HD superfamily phosphohydrolase | |||
| 2924 | phage repressor protein CI | |||
| 2925 | M | M.EcoE2863ORF2986P (99% identity) | CTGCAG | M.Eco122715ORF2925P |
| 2926 | R | EcoF690ORF30660P (100% identity) | CTGCAG | Eco122715ORF2925P |
| 2927 | 156 aa hypothetical protein | |||
| 2949 | regulatory protein | |||
| 2950 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco122715ORF2950P |
| 2951 | 70 aa hypothetical protein | |||
| 3844 | global DNA-binding transcriptional dual | |||
| 3845 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco122715ORF3845P |
| 3846 | uncharacterized protein YhdU | |||
| 3943 | D-ribulose-5-phosphate 3-epimerase | |||
| 3944 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco122715DamP |
| 3945 | cell division protein DamX | |||
| 4549 | 77 aa hypothetical protein | |||
| 4550 | M | M.SflFF35ORF20P (100% identity) | M.Eco122715ORF4550P | |
| 4551 | 330 aa hypothetical protein | |||
| 4972 | 678 aa hypothetical protein | |||
| 4973 | R | Eco3084ORFIP (88% identity) | Eco122715ORF4973P | |
| 4974 | IS3 family transposase | |||
| 4982 | ATP-dependent helicase | |||
| 4983 | RM | EcoE115ORF5155P (100% identity) | Eco122715ORF4983P | |
| plasmid pO145_122715_1 | ||||
| 43 | DUF1281 family protein | |||
| 44 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco122715ORF44P |
| 45 | 73 aa hypothetical protein | |||
| plasmid pO145_122715_2 | ||||
| 32 | 92 aa hypothetical protein | |||
| 33 | M | M.EcoZLWTORF24570P (96% identity) | M.Eco122715ORF33P | |
| 34 | 89 aa hypothetical protein | |||