Glaesserella parasuis HPS-1 |
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Putative Glaesserella parasuis HPS-1 RM systems
Ref: Yan,H. et al. unpublished
REBASE ref # 29709
Complete sequence: 2,326,414 bp
GenBank #: CP040243
REBASE acronym: GpaHPS1
Org_num: 37741
All begin FEF05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6640 | histidinol-phosphate transaminase | |||
| 6645 | R | HpaSHORF348P (98% identity) | GpaHPS1ORF6660P | |
| 6650 | 343 aa hypothetical protein | |||
| 6655 | S | S.Hpa120103ORFIP (62% identity) | S.GpaHPS1ORF6660P | |
| 6660 | M | M.GpaHF57ORF5595P (99% identity) | M.GpaHPS1ORF6660P | |
| 6665 | adenine methyltransferase | |||
| 7475 | RNA polymerase sigma factor RpoE | |||
| 7480 | M | M.HpaNagORF693P (100% identity) | M.GpaHPS1ORF7480P | |
| 7485 | S | S.Hpa15995ORF790P (99% identity) | S.GpaHPS1ORF7480P | |
| 7490 | R | Gpa412ORF6110P (98% identity) | GpaHPS1ORF7480P | |
| 7495 | apolipoprotein N-acyltransferase | |||
| 11015 | 101 aa hypothetical protein | |||
| 11020 | R | GpaXP11ORF9310P (98% identity) | GpaHPS1ORF11045P | |
| 11025 | 146 aa hypothetical protein | |||
| 11030 | DUF1829 domain-containing protein | |||
| 11035 | S | S3.GpaHF57ORF9645P (98% identity) | S.GpaHPS1ORF11045P | |
| 11040 | anticodon nuclease | |||
| 11045 | M | M.HpaST41ORF7300P (99% identity) | M.GpaHPS1ORF11045P | |
| 11050 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 445 | 86 aa hypothetical protein | |||
| 450 | M | M.GpaHPS1ORF2210P (97% identity) | M.GpaHPS1ORF450P | |
| 455 | enoyl-CoA hydratase | |||
| 720 | 64 aa hypothetical protein | |||
| 725 | M | M.Gpa412ORF1330P (99% identity) | M.GpaHPS1ORF725P | |
| 730 | 86 aa hypothetical protein | |||
| 795 | IS1595 family transposase | |||
| 800 | R | HpaSHORF1918P (100% identity) | GACGC | GpaHPS1ORF805P |
| 805 | M | M.HpaSHORF1918P (100% identity) | GACGC | M1.GpaHPS1ORF805P |
| 810 | M | M.HpaSHORF1919P (100% identity) | GACGC | M2.GpaHPS1ORF805P |
| 815 | helix-turn-helix transcriptional regulator | |||
| 1085 | valine--tRNA ligase | |||
| 1090 | M | M.HpaSH03ORF8550P (99% identity) | M.GpaHPS1ORF1090P | |
| 1095 | R | HpaSHORF1983P (99% identity) | GpaHPS1ORF1090P | |
| 1100 | Fic family protein | |||
| 1350 | XRE family transcriptional regulator | |||
| 1355 | H | H.Hpa1471ORF3275P (84% identity) | H.GpaHPS1ORF1365P | |
| 1360 | R | Nsu21188ORFEP (81% identity) | GpaHPS1ORF1365P | |
| 1365 | M | M.Pma10699ORF1752P (93% identity) | M.GpaHPS1ORF1365P | |
| 1370 | IS1595 family transposase | |||
| 2205 | enoyl-CoA hydratase | |||
| 2210 | M | M.HpaST41ORF9765P (98% identity) | M.GpaHPS1ORF2210P | |
| 2215 | 86 aa hypothetical protein | |||
| 2845 | helix-turn-helix transcriptional regulator | |||
| 2850 | M | M.HpaSHORF1919P (100% identity) | GACGC | M1.GpaHPS1ORF2850P |
| 2855 | M | M.HpaSHORF1918P (100% identity) | GACGC | M2.GpaHPS1ORF2850P |
| 2860 | R | HpaSHORF1918P (100% identity) | GACGC | GpaHPS1ORF2850P |
| 2865 | IS1595 family transposase | |||
| 3110 | 2-hydroxyacid dehydrogenase | |||
| 3115 | R | Gpa1808ORF2270P (100% identity) | GpaHPS1ORF3120P | |
| 3120 | M | M.HpaST41ORF8905P (100% identity) | M.GpaHPS1ORF3120P | |
| 3125 | flavodoxin-dependent | |||
| 3920 | sodium-dependent transporter | |||
| 3925 | M | M.HpaSW114ORF1907P (100% identity) | GATC | M.GpaHPS1ORF3925P |
| 3930 | 3-dehydroquinate synthase | |||
| 5340 | chromosome partition protein MukE | |||
| 5345 | M | M.Gpa912ORF6985P (100% identity) | M.GpaHPS1ORF5345P | |
| 5350 | 199 aa hypothetical protein | |||
| 6360 | restriction endonuclease | |||
| 6365 | R | GpaHF57ORF9915P (100% identity) | GpaHPS1ORF6370P | |
| 6370 | M | M.HpaD74ORF1280P (99% identity) | M.GpaHPS1ORF6370P | |
| 6375 | M48 family metallopeptidase | |||
| 8340 | transposase | |||
| 8345 | M | M.Gpa412ORF4725P (99% identity) | M.GpaHPS1ORF8345P | |
| 8350 | aspartate-semialdehyde dehydrogenase | |||
| 10795 | virulence RhuM family protein | |||
| 10800 | S | S3.GpaH80ORF9365P (88% identity) | S2.GpaHPS1ORF10810P | |
| 10805 | S | S1.Gpa4ORF1255P (95% identity) | S1.GpaHPS1ORF10810P | |
| 10810 | RM | Hpa33ORF5785P (99% identity) | GpaHPS1ORF10810P | |
| 10815 | DUF4143 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10300 | Fic family protein | |||
| 10305 | R | HpaST41ORF5850P (99% identity) | GpaHPS1ORF10310P | |
| 10310 | M | M1.Hpa15995ORF1371P (90% identity) | M.GpaHPS1ORF10310P | |
| 10315 | restriction endonuclease subunit M | |||