Salmonella enterica subsp. enterica serovar Indiana FJC33 |
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Putative Salmonella enterica subsp. enterica serovar Indiana FJC33 RM systems
Ref: Fang,L. unpublished
REBASE ref # 21746
Complete sequence: 4,941,329 bp
GenBank #: CP041699
REBASE acronym: SenFJC33
Org_num: 35707
All begin FOL37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4560 | transposase | |||
| 4565 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | SenFJC33ORF4570P |
| 4570 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.SenFJC33ORF4570P |
| 4575 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.SenFJC33ORF4570P |
| 4580 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.SenFJC33DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenFJC33ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 3170 | DUF3850 domain-containing protein | |||
| 3175 | M | M.SspZ54ORF6040P (100% identity) | M.SenFJC33ORF3175P | |
| 3180 | replication endonuclease | |||
| 3645 | DEAD/DEAH box helicase | |||
| 3650 | RM | SflLIN17ORF3140P (100% identity) | SenFJC33ORF3650P | |
| 3655 | IS110 family transposase | |||
| 10205 | phosphohydrolase | |||
| 10210 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenFJC33DcmP |
| 10215 | V | V.Sensp14178DcmP (100% identity) | V.SenFJC33DcmP | |
| 10220 | drug/metabolite exporter YedA | |||
| 20895 | YebC/PmpR family DNA-binding transcriptional | |||
| 20900 | R | Sensp14178ORF19855P (100% identity) | SenFJC33ORF20900P | |
| 20905 | 347 aa hypothetical protein | |||
| 20945 | RNA polymerase subunit sigma | |||
| ??? | R | SensS90ORFEP (100% identity) | SenFJC33ORF20950P | |
| 20955 | malate transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18275 | 33 aa hypothetical protein | |||
| 18280 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenFJC33ORF18290P |
| 18285 | IS1 family transposase | |||
| 18290 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.SenFJC33ORF18290P |
| 18295 | MFS transporter | |||
| 20980 | S8 family peptidase | |||
| 20985 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenFJC33ORF20985P |
| 20990 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenFJC33ORF20985P |
| 20995 | DUF4102 domain-containing protein | |||