Escherichia coli O16:H48 CV601gfp |
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Putative Escherichia coli O16:H48 CV601gfp RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
Complete sequence: 4,698,238 bp
GenBank #: CP043213
REBASE acronym: EcoCV601
Org_num: 36772
All begin FYA04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1855 | endoribonuclease SymE | |||
| 1860 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoCV601ORF1865P |
| 1865 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoCV601ORF1865P |
| 1870 | R | EcoW25113ORF11385P (99% identity) | AACNNNNNNGTGC | EcoCV601ORF1865P |
| 1875 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12465 | drug/metabolite exporter YedA | |||
| 12470 | V | V.SflFF64DcmP (100% identity) | V.EcoCV601DcmP | |
| 12475 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCV601DcmP |
| 12480 | phosphohydrolase | |||
| 18960 | DNA-binding transcriptional regulator Fis | |||
| 18965 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoCV601ORF18965P |
| 18970 | DUF2556 domain-containing protein | |||
| 19615 | ribulose-phosphate 3-epimerase | |||
| 19620 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCV601DamP |
| 19625 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1840 | 906 aa hypothetical protein | |||
| 1845 | R | SenHNK130McrCP (100% identity) | EcoCV601McrCP | |
| 1850 | R | SenHNK130McrBP (100% identity) | EcoCV601McrBP | |
| 1855 | endoribonuclease SymE | |||
| 1870 | type I restriction-modification system | |||
| 1875 | R | SenHNK130MrrP (100% identity) | EcoCV601MrrP | |
| 1880 | GTPase | |||
| 8235 | site-specific DNA recombinase | |||
| 8240 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoCV601ORF8240P |
| 8245 | isocitrate dehydrogenase | |||