Escherichia coli O16:H48 PG20180063 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O16:H48 PG20180063 RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
Complete sequence: 4,656,756 bp
GenBank #: CP043193
REBASE acronym: Eco180063
Org_num: 36782
All begin FYA14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19415 | Mrr restriction system protein | |||
| ??? | R | EcoMC01IP (100% identity) | AACNNNNNNGTGC | Eco180063ORF19425P |
| 19425 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco180063ORF19425P |
| 19430 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco180063ORF19425P |
| 19435 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1655 | cell division protein DamX | |||
| 1660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco180063DamP |
| 1665 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 domain-containing protein | |||
| 2315 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco180063ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 8800 | phosphohydrolase | |||
| 8805 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco180063DcmP |
| 8810 | V | V.SflFF64DcmP (100% identity) | V.Eco180063DcmP | |
| 8815 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13030 | isocitrate dehydrogenase | |||
| 13035 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco180063ORF13035P |
| 13040 | site-specific DNA recombinase | |||
| 19410 | GTPase | |||
| 19415 | R | SenHNK130MrrP (100% identity) | Eco180063MrrP | |
| 19420 | type I restriction-modification system | |||
| 19410 | GTPase | |||
| ??? | R | EcoZK126MrrP (100% identity) | Eco180063Mrr2P | |
| 19420 | type I restriction-modification system | |||
| 19435 | endoribonuclease SymE | |||
| 19440 | R | SenHNK130McrBP (100% identity) | Eco180063McrBP | |
| 19445 | R | SenHNK130McrCP (100% identity) | Eco180063McrCP | |
| 19450 | 906 aa hypothetical protein | |||