Escherichia coli O16:H48 PG20180060 |
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Putative Escherichia coli O16:H48 PG20180060 RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
Complete sequence: 4,668,071 bp
GenBank #: CP043199
REBASE acronym: Eco180060
Org_num: 36779
All begin FYA11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4465 | endoribonuclease SymE | |||
| 4470 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco180060ORF4475P |
| 4475 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco180060ORF4475P |
| 4480 | R | EcoW25113ORF11385P (99% identity) | AACNNNNNNGTGC | Eco180060ORF4475P |
| 4485 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15085 | drug/metabolite exporter YedA | |||
| 15090 | V | V.SflFF64DcmP (100% identity) | V.Eco180060DcmP | |
| 15095 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco180060DcmP |
| 15100 | phosphohydrolase | |||
| 21675 | DNA-binding transcriptional regulator Fis | |||
| 21680 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco180060ORF21680P |
| 21685 | DUF2556 domain-containing protein | |||
| 22330 | ribulose-phosphate 3-epimerase | |||
| 22335 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco180060DamP |
| 22340 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4450 | 906 aa hypothetical protein | |||
| 4455 | R | SenHNK130McrCP (100% identity) | Eco180060McrCP | |
| 4460 | R | SenHNK130McrBP (100% identity) | Eco180060McrBP | |
| 4465 | endoribonuclease SymE | |||
| 4480 | type I restriction-modification system | |||
| 4485 | R | SenHNK130MrrP (100% identity) | Eco180060MrrP | |
| 4490 | GTPase | |||
| 10850 | site-specific DNA recombinase | |||
| 10855 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco180060ORF10855P |
| 10860 | isocitrate dehydrogenase | |||