Escherichia coli O80:H26 EC-107 |
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Putative Escherichia coli O80:H26 EC-107 RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
| Sequence length: | GenBank #: | |
| Chromosome: | 5,075,343 bp | CP043217 |
| plasmid pET6.1-IncY: | 102,028 bp | CP043218 |
| plasmid pET6.2-IncFII: | 94,175 bp | CP043219 |
REBASE acronym: EcoEC107
Org_num: 36791
All begin FYA02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5350 | restriction system-associated AAA family ATPase | |||
| 5355 | S | S.Sen64034II (70% identity) | S1.EcoEC107ORF5370P | |
| 5360 | IS3 family transposase | |||
| 5365 | S | S.Sen64034II (29% identity) | S2.EcoEC107ORF5370P | |
| 5370 | M | M.Sen64034II (100% identity) | M.EcoEC107ORF5370P | |
| 17485 | DNA-binding protein | |||
| 17490 | M | M.SflFF80ORF4075P (100% identity) | M.EcoEC107ORF17490P | |
| 17495 | S | S.EcoC0004ORF23975P (100% identity) | S.EcoEC107ORF17490P | |
| 17500 | R | EcoC0004ORF23975P (100% identity) | EcoEC107ORF17490P | |
| 17505 | lactate utilization protein C | |||
| plasmid pET6.1-IncY | ||||
| 25640 | type II toxin-antitoxin system Phd/YefM family | |||
| 25645 | M | M.EcoSHP24ORF26410P (99% identity) | M.EcoEC107ORF25645P | |
| 25650 | S | S.Eal161ORF22255P (100% identity) | S.EcoEC107ORF25645P | |
| 25655 | R | EcoB093ORF2882P (99% identity) | EcoEC107ORF25645P | |
| 25660 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4695 | drug/metabolite exporter YedA | |||
| 4700 | V | V.SsoSE61DcmP (100% identity) | V.EcoEC107DcmP | |
| 4705 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoEC107DcmP |
| 4710 | phosphohydrolase | |||
| 4965 | DUF1737 domain-containing protein | |||
| 4985 | M | M.EcoS7005ORFLP (100% identity) | M.EcoEC107ORF4985P | |
| 4990 | TrmB family transcriptional regulator | |||
| 8945 | ribosome-associated translation inhibitor RaiA | |||
| 8950 | M | M.SenYU39ORF1896P (100% identity) | M.EcoEC107ORF8950P | |
| 8955 | Com family DNA-binding transcriptional | |||
| 12800 | DNA-binding transcriptional regulator Fis | |||
| 12805 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoEC107ORF12805P |
| 12810 | DUF2556 domain-containing protein | |||
| 13445 | ribulose-phosphate 3-epimerase | |||
| 13450 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC107DamP |
| 13455 | cell division protein DamX | |||
| 22880 | recombination protein NinB | |||
| 22885 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoEC107ORF22885P |
| 22890 | NinE family protein | |||
| plasmid pET6.1-IncY | ||||
| 25780 | 63 aa hypothetical protein | |||
| ??? | M | M.EphP1ORF2P (37% identity) | M1.EcoEC107ORF25795P | |
| ??? | M | M.EcoZ1002ORF27110P (59% identity) | M2.EcoEC107ORF25795P | |
| 25800 | recombination-associated protein RdgC | |||
| plasmid pET6.2-IncFII | ||||
| 26160 | 61 aa hypothetical protein | |||
| 26165 | M | M.Eco8959ORF190P (100% identity) | M.EcoEC107ORF26165P | |
| 26170 | 73 aa hypothetical protein | |||