Histophilus somni KLM-ASF-09 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Histophilus somni KLM-ASF-09 RM systems
Ref: Mostafa Nazari,M. and Liljebjelke,K. unpublished
REBASE ref # 29731
Complete sequence: 2,099,410 bp
GenBank #: CP042959
REBASE acronym: HsoASF09
Org_num: 37810
All begin FVP83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3650 | CTP synthetase | |||
| 3655 | S | S1.HsoF09ORF4065P (100% identity) | S1.HsoASF09ORF3655P | |
| 3660 | site-specific integrase | |||
| 3665 | S | S1.HsoATR09ORF6040P (22% identity) | S2.HsoASF09ORF3655P | |
| 3670 | abortive phage resistance protein | |||
| 3675 | R | HsoMASF01ORF4110P (100% identity) | HsoASF09ORF3655P | |
| 3680 | restriction endonuclease subunit S | |||
| 4990 | exodeoxyribonuclease I | |||
| 4995 | R | HsoMASF01ORF5515P (100% identity) | HsoASF09ORF5025P | |
| 5000 | 174 aa hypothetical protein | |||
| 5005 | S | S.HsoMASF01ORF5515P (43% identity) | S1.HsoASF09ORF5025P | |
| 5010 | restriction endonuclease subunit S | |||
| 5015 | S | S2.HsoF09ORF5440P (100% identity) | S2.HsoASF09ORF5025P | |
| 5020 | Fic family protein | |||
| 5025 | M | M.HsoF09ORF5440P (100% identity) | M.HsoASF09ORF5025P | |
| 5030 | DMT family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1895 | 264 aa hypothetical protein | |||
| 1900 | M | M.HsoMASF01ORF1910P (100% identity) | M.HsoASF09ORF1900P | |
| 1905 | polymer-forming cytoskeletal protein | |||
| 1990 | replication protein P | |||
| 1995 | M | M.HsoF09ORF2030P (100% identity) | M.HsoASF09ORF1995P | |
| 2000 | DUF1367 family protein | |||
| 6230 | 3-dehydroquinate synthase | |||
| 6235 | M | M.HsoF09ORF6645P (100% identity) | M.HsoASF09ORF6235P | |
| 6240 | UTP--glucose-1-phosphate uridylyltransferase | |||
| 7165 | valine--tRNA ligase | |||
| 7170 | M | M.HsoF09ORF7580P (100% identity) | M.HsoASF09ORF7170P | |
| 7175 | TdeIII family type II restriction endonuclease | |||
| 7520 | DUF4868 domain-containing protein | |||
| 7525 | V | V.HsoMASF01ORF8025P (100% identity) | V.HsoASF09ORF7535P | |
| 7530 | R | HsoKLM014ORF8080P (100% identity) | HsoASF09ORF7535P | |
| 7535 | M | M.HsoKLM014ORF8080P (100% identity) | M.HsoASF09ORF7535P | |
| 7540 | C | C.HsoMASF01ORF8025P (100% identity) | C.HsoASF09ORF7535P | |
| 7545 | site-specific integrase | |||
| 7990 | cell filamentation protein Fic | |||
| 7995 | RM | HsoF09ORF8405P (100% identity) | HsoASF09ORF7995P | |
| 8000 | HrgA protein | |||
| 8845 | helix-turn-helix domain-containing protein | |||
| 8850 | RM | HsoF09ORF9270P (100% identity) | HsoASF09ORF8850P | |
| 8855 | S | S.HsoF09ORF9270P (100% identity) | S.HsoASF09ORF8850P | |
| 8860 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||