Helicobacter pylori G-Mx-2005-337 |
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Putative Helicobacter pylori G-Mx-2005-337 RM systems
Ref: Torres,R.C. et al. unpublished
REBASE ref # 29728
Complete sequence: 1,697,806 bp
GenBank #: CP032041
REBASE acronym: Hpy5337
Org_num: 37792
All begin D2C76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | hydroxyethylthiazole kinase | |||
| 2075 | R | HpyNCI26ORFA1P (100% identity) | Hpy5337ORF2085P | |
| 2080 | S | S.HpyU419ORF3850P (93% identity) | S.Hpy5337ORF2085P | |
| ??? | M | M.HpyNCI26ORFA1P (100% identity) | M.Hpy5337ORF2085P | |
| 2100 | relaxase | |||
| 2710 | DUF115 domain-containing protein | |||
| 2715 | R | HpyNCI26ORFVP (100% identity) | Hpy5337ORF2720P | |
| 2720 | M | M.HpyNCI26ORFVP (100% identity) | M.Hpy5337ORF2720P | |
| 2725 | S | S.HpyBR17ORF2265P (98% identity) | S.Hpy5337ORF2720P | |
| 2735 | RNA degradosome polyphosphate kinase | |||
| 5675 | cagY like domain protein | |||
| 5680 | S | S.HpyMT5118ORF6610P (98% identity) | S.Hpy5337ORF5685P | |
| 5685 | M | M.HpyNCI26ORFJP (100% identity) | M.Hpy5337ORF5685P | |
| ??? | R | HpyNCI26ORFJP (100% identity) | Hpy5337ORF5685P | |
| 5695 | adenine methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 335 | ATP-dependent helicase | |||
| 340 | M | M.HpyCOL308VII (97% identity) | GTNNAC | M.Hpy5337ORF340P |
| 345 | R | HpyNCI26VIIP (100% identity) | GTNNAC | Hpy5337ORF340P |
| 350 | flagellar hook protein FlgE | |||
| 900 | 3-5 exonuclease | |||
| 905 | R | HpyNCI26IXP (100% identity) | CCNNGG | Hpy5337ORF910P |
| 910 | M | M.HpyU204IV (100% identity) | CCNNGG | M.Hpy5337ORF910P |
| 915 | 3-5 exonuclease | |||
| 1010 | 350 aa hypothetical protein | |||
| 1015 | RM | HpyNCI26ORFC1P (100% identity) | Hpy5337ORF1015P | |
| 1020 | (Fe-S)-binding protein | |||
| 2385 | acetyl-CoA carboxylase biotin carboxylase | |||
| 2390 | M | M.HpyNCI26ORFZP (100% identity) | M.Hpy5337ORF2390P | |
| 2395 | transposase | |||
| 2400 | IS200/IS605 family transposase | |||
| 2405 | type II restriction endonuclease | |||
| 2410 | R | HpyC20VIIIP (99% identity) | TCNNGA | Hpy5337ORF2390P |
| 2415 | Laminin subunit alpha-2 precursor | |||
| 2600 | DUF262 domain-containing protein | |||
| ??? | R | HpyNCI26ORFWP (90% identity) | ACGT | Hpy5337ORF2610P |
| 2610 | M | M.HpyI020ORF5175P (97% identity) | ACGT | M.Hpy5337ORF2610P |
| 2615 | GIY-YIG nuclease family protein | |||
| 2610 | DNA cytosine methyltransferase | |||
| 2615 | R | HpyNCI26IVP (100% identity) | ACNGT | Hpy5337ORF2620P |
| 2620 | M | M.HpyNCI26IV (100% identity) | ACNGT | M.Hpy5337ORF2620P |
| 2625 | translational GTPase TypA | |||
| 2630 | lipopolysaccharide heptosyltransferase family | |||
| 2635 | M | M.HpyU427ORF2245P (96% identity) | M.Hpy5337ORF2635P | |
| 2640 | outer membrane protein | |||
| 3625 | AAA family ATPase | |||
| 3630 | M | M.HpyNCI26V (100% identity) | CCGG | M.Hpy5337ORF3630P |
| 3635 | R | Hpy1145ORF1820P (100% identity) | CCGG | Hpy5337ORF3630P |
| 3640 | 148 aa hypothetical protein | |||
| 3640 | 148 aa hypothetical protein | |||
| 3645 | M | M.HpyGCT97ORF1260P (99% identity) | TCGA | M.Hpy5337ORF3645P |
| 3650 | exodeoxyribonuclease VII large subunit | |||
| 4475 | alpha-1,2-fucosyltransferase | |||
| 4480 | M | M.HpyNCI26III (100% identity) | GATC | M.Hpy5337ORF4480P |
| 4485 | R | HpyNCI26IIIP (100% identity) | GATC | Hpy5337ORF4480P |
| 4495 | [acyl-carrier-protein] S-malonyltransferase | |||
| 4670 | sodium/proline symporter PutP | |||
| 4675 | R | HNH endonuclease | CCTC | Hpy5337ORF4680P |
| 4680 | DNA cytosine methyltransferase | |||
| 4685 | M | site-specific DNA-methyltransferase | CCTC | M2.Hpy5337ORF4680P |
| 4690 | agmatine deiminase | |||
| 5260 | 68 aa hypothetical protein | |||
| 5265 | M | M.HpyNCI26ORFQP (100% identity) | M.Hpy5337ORF5265P | |
| 5270 | 196 aa hypothetical protein | |||
| 5480 | S41 family peptidase | |||
| ??? | RM | HpyNCI26ORFNP (100% identity) | Hpy5337ORF5485P | |
| 5495 | adenine methyltransferase | |||
| 5490 | 204 aa hypothetical protein | |||
| ??? | M | M.HpyNCI26ORFOP (100% identity) | M2.Hpy5337ORF5495P | |
| 5500 | M | M2.HpySP706IV (100% identity) | CCATC | M1.Hpy5337ORF5495P |
| 5505 | R | HpyNCI26ORFOP (100% identity) | CCATC | Hpy5337ORF5495P |
| 5510 | outer membrane protein | |||
| 5585 | 179 aa hypothetical protein | |||
| 5590 | RM | HpyNCI26ORFLP (100% identity) | Hpy5337ORF5590P | |
| 5595 | DEAD/DEAH box helicase | |||
| 5690 | HsdR family type I site-specific | |||
| 5695 | M | M.HpyNCI26ORFKP (93% identity) | M.Hpy5337ORF5695P | |
| 5700 | YjgP/YjgQ family permease | |||
| 5825 | ComF family protein | |||
| 5830 | RM | HpyNCI26ORFIP (100% identity) | Hpy5337ORF5830P | |
| 5835 | S | S.HpyNCI26ORFIP (100% identity) | S.Hpy5337ORF5830P | |
| 5840 | DNA polymerase I | |||
| 5885 | addiction module antidote protein | |||
| 5890 | M | M2.HpyT004ORF7255P (100% identity) | M.Hpy5337ORF5890P | |
| 5895 | DNA (cytosine-5-)-methyltransferase | |||
| 5890 | DNA (cytosine-5-)-methyltransferase | |||
| 5895 | M | M1.HpyT009ORF7050P (100% identity) | M.Hpy5337ORF5895P | |
| 5900 | R | HpyT009ORF7050P (100% identity) | Hpy5337ORF5895P | |
| 5905 | cytochrome-c peroxidase | |||
| 6280 | site-specific DNA-methyltransferase | |||
| 6285 | M | M1.HpyK114VIII (100% identity) | GAAGA | M1.Hpy5337ORF6285P |
| 6290 | M | M2.HpyNCI26IIP (100% identity) | GAAGA | M2.Hpy5337ORF6285P |
| 6295 | R | HpyNCI26IIP (98% identity) | GAAGA | Hpy5337ORF6285P |
| 6300 | DNA-binding response regulator | |||
| 6350 | carboxylating nicotinate-nucleotide | |||
| 6355 | M | M.HpyNCI26ORFDP (98% identity) | M.Hpy5337ORF6355P | |
| 6360 | IS607 family transposase | |||
| 6575 | lipopolysaccharide heptosyltransferase family | |||
| 6580 | R | HpyNCI26ORFCP (97% identity) | Hpy5337ORF6585P | |
| 6585 | M | M.HpyNCI26ORFCP (100% identity) | M.Hpy5337ORF6585P | |
| 6590 | lipopolysaccharide heptosyltransferase family | |||
| 6980 | serine acetyltransferase | |||
| 6985 | R | HpyNCI26IP (100% identity) | CATG | Hpy5337ORF6990P |
| 6990 | M | M.HpyNCI26I (100% identity) | CATG | M.Hpy5337ORF6990P |
| 6995 | HAD family hydrolase | |||
| 7460 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 7465 | M | M.HpyNCI26ORFAP (100% identity) | M.Hpy5337ORF7465P | |
| 7470 | 144 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5590 | class I SAM-dependent DNA methyltransferase | |||
| 5595 | R | HpyNCI26ORFMP (100% identity) | Hpy5337ORF5600P | |
| ??? | M | M.HpyNCI26ORFMP (100% identity) | M.Hpy5337ORF5600P | |
| 5610 | ATP-dependent DNA helicase RecG | |||
| 6195 | biotin synthase | |||
| 6200 | R | HpyNCI26ORFGP (98% identity) | Hpy5337ORF6205P | |
| 6205 | M | M.HpyNCI26ORFGP (100% identity) | M.Hpy5337ORF6205P | |
| 6210 | DNA/RNA non-specific endonuclease | |||
| 6265 | rod shape-determining protein MreC | |||
| 6270 | R | HpyNCI26ORFEP (100% identity) | Hpy5337ORF6275P | |
| ??? | M | M.HpyNCI26ORFEP (100% identity) | M.Hpy5337ORF6275P | |
| 6285 | site-specific DNA-methyltransferase | |||