Escherichia coli GZ04-0086 |
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Putative Escherichia coli GZ04-0086 RM systems
Ref: Yang,L. unpublished
REBASE ref # 27268
| Sequence length: | GenBank #: | |
| Chromosome: | 4,809,386 bp | CP042336 |
| plasmid pCTXM-GZ04: | 159,610 bp | CP042337 |
| plasmid pNDM5-GZ04_2: | 68,545 bp | CP042338 |
REBASE acronym: Eco0086
Org_num: 36730
All begin E3B71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18525 | transcriptional regulator | |||
| 18530 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | Eco0086ORF18545P |
| ??? | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.Eco0086ORF18545P |
| 18545 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.Eco0086ORF18545P |
| 18550 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2045 | TrmB family transcriptional regulator | |||
| 2050 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco0086ORF2050P |
| 2065 | DUF3927 domain-containing protein | |||
| 5935 | drug/metabolite exporter YedA | |||
| 5940 | V | V.SflSTLE1DcmP (100% identity) | V.Eco0086DcmP | |
| 5945 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco0086DcmP |
| 5950 | phosphohydrolase | |||
| 7335 | phage lysis protein EssD | |||
| 7340 | M | M.Sso63633ORF22290P (100% identity) | M.Eco0086ORF7340P | |
| 7345 | 67 aa hypothetical protein | |||
| 12840 | DNA-binding transcriptional regulator Fis | |||
| 12845 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco0086ORF12845P |
| 12850 | DUF2556 domain-containing protein | |||
| 13470 | ribulose-phosphate 3-epimerase | |||
| 13475 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0086DamP |
| 13480 | cell division protein DamX | |||
| 20450 | PerC family transcriptional regulator | |||
| 20455 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco0086ORF7390P |
| 20460 | LexA family transcriptional regulator | |||
| 20500 | 67 aa hypothetical protein | |||
| 20505 | M | M.Sso63633ORF22290P (63% identity) | M.Eco0086ORF20505P | |
| 20510 | IS3-like element IS2 family transposase | |||
| plasmid pCTXM-GZ04 | ||||
| 24570 | 73 aa hypothetical protein | |||
| 24575 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco0086ORF24575P | |
| 24580 | 0 aa hypothetical protein | |||
| plasmid pNDM5-GZ04_2 | ||||
| 24890 | 59 aa hypothetical protein | |||
| 24895 | M | M.Xca80ORFEP (100% identity) | M.Eco0086ORF24895P | |
| 24900 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18550 | DUF4942 domain-containing protein | |||
| 18555 | R | SflSTLE4McrBP (100% identity) | Eco0086McrBP | |
| 18560 | R | SflSTLE4McrCP (100% identity) | Eco0086McrCP | |
| 18565 | HNH endonuclease | |||