Escherichia coli NCYU-21-79 |
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Putative Escherichia coli NCYU-21-79 RM systems
Ref: Hsu,C.-Y. et al. unpublished
REBASE ref # 29322
| Sequence length: | GenBank #: | |
| Chromosome: | 5,072,135 bp | CP042645 |
| plasmid pNCYU-21-79-1: | 184,695 bp | CP042646 |
REBASE acronym: Eco2179
Org_num: 36749
All begin FTV90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7975 | 62 aa hypothetical protein | |||
| 7980 | S | S.EcoR13I (42% identity) | S.Eco2179ORF7985P | |
| 7985 | M | M.EfeEF02ORF206830P (98% identity) | M.Eco2179ORF7985P | |
| 7990 | R | Eco502CCORF39910P (99% identity) | Eco2179ORF7985P | |
| 7995 | restriction endonuclease | |||
| 18865 | M48 family metallopeptidase | |||
| 18870 | R | Eco64EVAORFGP (99% identity) | Eco2179ORF18885P | |
| 18875 | YecA family protein | |||
| 18880 | S | S1.EcoVEF10ORF18030P (99% identity) | S.Eco2179ORF18885P | |
| 18885 | M | M.EcoVEF10ORF18030P (99% identity) | M.Eco2179ORF18885P | |
| 18890 | 388 aa hypothetical protein | |||
| 25110 | GTPase family protein | |||
| 25115 | M | M.SflFF34ORF9300P (100% identity) | M.Eco2179ORF25115P | |
| 25120 | S | S.SflN97ORF14060P (100% identity) | S.Eco2179ORF25115P | |
| 25125 | R | SflFF34ORF9300P (99% identity) | Eco2179ORF25115P | |
| 25130 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 545 | DNA-binding transcriptional regulator Fis | |||
| 550 | M | M.Eco2919ORF545P (100% identity) | ATGCAT | M.Eco2179ORF550P |
| 555 | DUF2556 domain-containing protein | |||
| 1200 | ribulose-phosphate 3-epimerase | |||
| 1205 | M | M.EcoM1D1DamP (89% identity) | M.Eco2179DamP | |
| 1210 | cell division protein DamX | |||
| 2825 | 202 aa hypothetical protein | |||
| 2830 | M | M.YpsF1ORFBP (99% identity) | M.Eco2179ORF2830P | |
| 2835 | 0 aa hypothetical protein | |||
| 3420 | thermonuclease family protein | |||
| 3425 | M | M.Eco2673ORF25540P (100% identity) | M.Eco2179ORF3425P | |
| 3430 | DUF1173 domain-containing protein | |||
| 9740 | PerC family transcriptional regulator | |||
| ??? | M | M.EcoSO40ORF27175P (99% identity) | M.Eco2179ORF9745P | |
| 9755 | LexA family transcriptional regulator | |||
| 12975 | TraR/DksA family transcriptional regulator | |||
| 12980 | M | M.EcoS081ORF28560P (99% identity) | M.Eco2179ORF12980P | |
| 12985 | replication endonuclease | |||
| 19230 | drug/metabolite exporter YedA | |||
| 19235 | V | V.SsoL4094DcmP (98% identity) | V.Eco2179DcmP | |
| 19240 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2179DcmP |
| 19245 | phosphohydrolase | |||
| 20050 | transcription factor | |||
| 20055 | R | EcoYSP81ORFBP (100% identity) | RCSRC | Eco2179ORF20055P |
| 20060 | 0 aa hypothetical protein | |||
| plasmid pNCYU-21-79-1 | ||||
| 25715 | 158 aa hypothetical protein | |||
| 25720 | M | M.YrupYR1ORFCP (62% identity) | M.Eco2179ORF25720P | |
| 25725 | phage integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7990 | type I restriction-modification system | |||
| 7995 | R | Eco55972MrrP (99% identity) | Eco2179MrrP | |
| 8000 | GTPase | |||