Escherichia coli NCYU-25-82 |
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Putative Escherichia coli NCYU-25-82 RM systems
Ref: Hsu,C.-Y. et al. unpublished
REBASE ref # 29322
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,035 bp | CP042627 |
| plasmid pNCYU-25-82-1_MCR3: | 209,908 bp | CP042628 |
| plasmid pNCYU-25-82-2: | 149,622 bp | CP042629 |
| plasmid pNCYU-25-82-3: | 138,251 bp | CP042630 |
| plasmid pNCYU-25-82-4: | 123,137 bp | CP042631 |
| plasmid pNCYU-25-82-5: | 94,735 bp | CP042632 |
| plasmid pNCYU-25-82-6: | 89,339 bp | CP042633 |
REBASE acronym: Eco2582
Org_num: 36751
All begin FTV92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14540 | restriction endonuclease | |||
| 14545 | M | M.EcoLR13ORF25400P (100% identity) | M.Eco2582ORF14545P | |
| 14550 | S | S.EcoLR13ORF25400P (99% identity) | S.Eco2582ORF14545P | |
| 14555 | R | Eco212RORF2360P (99% identity) | Eco2582ORF14545P | |
| 14560 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3490 | phosphohydrolase | |||
| 3495 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco2582DcmP |
| 3500 | V | V.EcoR42DcmP (100% identity) | V.Eco2582DcmP | |
| 3505 | drug/metabolite exporter YedA | |||
| 12675 | LexA family transcriptional regulator | |||
| ??? | M | M.EcoXH990ORF8990P (99% identity) | M.Eco2582ORF12680P | |
| 12690 | PerC family transcriptional regulator | |||
| 17165 | Com family DNA-binding transcriptional | |||
| 17170 | M | M.SenYU39ORF1896P (95% identity) | M.Eco2582ORF17170P | |
| 17175 | septal ring assembly protein ZapB | |||
| 20335 | cell division protein DamX | |||
| 20340 | M | M.Eco2919DamP (100% identity) | GATC | M.Eco2582DamP |
| 20345 | ribulose-phosphate 3-epimerase | |||
| 20905 | DUF2556 domain-containing protein | |||
| 20910 | M | M.SflLIN12ORF2260P (99% identity) | M.Eco2582ORF20910P | |
| 20915 | DNA-binding transcriptional regulator Fis | |||
| 24690 | Com family DNA-binding transcriptional | |||
| 24695 | M | M.SenYU39ORF1896P (100% identity) | M.Eco2582ORF24695P | |
| 24700 | ribosome-associated translation inhibitor RaiA | |||
| plasmid pNCYU-25-82-1_MCR3 | ||||
| 25455 | thermonuclease family protein | |||
| 25460 | M | M.YpsF1ORFCP (100% identity) | M.Eco2582ORF25460P | |
| 25465 | DUF1173 domain-containing protein | |||
| 26310 | 284 aa hypothetical protein | |||
| 26315 | M | M.SenBL10ORFDP (99% identity) | M.Eco2582ORF26315P | |
| 26320 | DNA-binding protein | |||
| plasmid pNCYU-25-82-2 | ||||
| 27025 | aerotaxis sensor receptor, flavoprotein | |||
| 27030 | M | M.Ecocq9ORF29710P (99% identity) | M.Eco2582ORF27030P | |
| 27035 | 73 aa hypothetical protein | |||
| plasmid pNCYU-25-82-3 | ||||
| 28015 | 0 aa hypothetical protein | |||
| 28020 | M | M.UbapRSB107ORFAP (99% identity) | M.Eco2582ORF28020P | |
| 28025 | 73 aa hypothetical protein | |||
| plasmid pNCYU-25-82-4 | ||||
| 28965 | 73 aa hypothetical protein | |||
| 28970 | M | M.StyR64ORFAP (99% identity) | M.Eco2582ORF28970P | |
| 28975 | 0 aa hypothetical protein | |||
| plasmid pNCYU-25-82-5 | ||||
| 29315 | glutamine--tRNA ligase | |||
| 29320 | M | M.Ecos195ORF24760P (100% identity) | M.Eco2582ORF29320P | |
| 29325 | 0 aa hypothetical protein | |||
| plasmid pNCYU-25-82-6 | ||||
| 30185 | 59 aa hypothetical protein | |||
| 30190 | M | M.Eco2673ORF28915P (99% identity) | M.Eco2582ORF30190P | |
| 30195 | 73 aa hypothetical protein | |||