Escherichia coli NCYU-29-19 |
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Putative Escherichia coli NCYU-29-19 RM systems
Ref: Hsu,C.-Y. et al. unpublished
REBASE ref # 29322
Complete sequence: 4,711,922 bp
GenBank #: CP042606
REBASE acronym: Eco2919
Org_num: 36753
All begin FTV94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8675 | 0 aa hypothetical protein | |||
| 8680 | M | M.Eco9091I (99% identity) | M.Eco2919ORF8680P | |
| 8685 | S | S.EcoVAORFGP (62% identity) | S.Eco2919ORF8680P | |
| 8690 | DUF4268 domain-containing protein | |||
| 8695 | R | Sso8ORF18020P (99% identity) | Eco2919ORF8680P | |
| 8700 | AAA family ATPase | |||
| 16990 | M48 family metallopeptidase | |||
| 16995 | R | Eco45C23ORF9365P (99% identity) | Eco2919ORF17015P | |
| 17000 | YecA family protein | |||
| 17005 | S | S.EcoCP61ORF17550P (16% identity) | S1.Eco2919ORF17015P | |
| 17010 | S | S.EcoG8ORF10120P (51% identity) | S2.Eco2919ORF17015P | |
| 17015 | M | M.EcoNT1F31ORF10715P (99% identity) | M.Eco2919ORF17015P | |
| 17020 | 0 aa hypothetical protein | |||
| 20850 | IS66 family transposase | |||
| 20855 | R | EcoB379ORF5755P (99% identity) | Eco2919ORF20865P | |
| 20860 | S | S.EcoB379ORF5755P (71% identity) | S.Eco2919ORF20865P | |
| 20865 | M | M.Efe65411ORF17490P (100% identity) | M.Eco2919ORF20865P | |
| 20870 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 540 | DNA-binding transcriptional regulator Fis | |||
| 545 | M | M.Eco2179ORF550P (100% identity) | ATGCAT | M.Eco2919ORF545P |
| 550 | DUF2556 domain-containing protein | |||
| 1195 | ribulose-phosphate 3-epimerase | |||
| 1200 | M | M.Eco2582DamP (100% identity) | GATC | M.Eco2919DamP |
| 1205 | cell division protein DamX | |||
| 17340 | drug/metabolite exporter YedA | |||
| 17345 | V | V.SsoSE61DcmP (100% identity) | V.Eco2919DcmP | |
| 17350 | M | M.EcoA23DcmP (100% identity) | CCWGG | M.Eco2919DcmP |
| 17355 | phosphohydrolase | |||
| 22430 | DEAD/DEAH box helicase | |||
| 22435 | RM | EcoPI12ORF3815P (96% identity) | Eco2919ORF22435P | |
| 22440 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13120 | recombinase family protein | |||
| 13125 | R | EcoA23McrBP (99% identity) | Eco2919McrBP | |
| 13130 | R | EcoPC1McrCP (99% identity) | Eco2919McrCP | |
| 13135 | isocitrate dehydrogenase | |||