Salmonella enterica CFSAN079107 |
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Putative Salmonella enterica CFSAN079107 RM systems
Ref: Hoffmann,M. and Sanchez,M. unpublished
REBASE ref # 29024
Complete sequence: 4,872,954 bp
GenBank #: CP042440
REBASE acronym: Sen79107
Org_num: 35670
All begin DA122_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19870 | 322 aa hypothetical protein | |||
| 19875 | R | Sen717ORF13395P (100% identity) | GAAYNNNNNNNCTGG | Sen79107ORF19880P |
| 19880 | M | M.Sen717ORF13395P (100% identity) | GAAYNNNNNNNCTGG | M.Sen79107ORF19880P |
| 19885 | S | S.Sen717ORF13395P (100% identity) | GAAYNNNNNNNCTGG | S.Sen79107ORF19880P |
| 19890 | endoribonuclease SymE | |||
| 20140 | toll/interleukin-1 receptor domain-containing | |||
| 20145 | M | M.Sen59896ORF18220P (100% identity) | M.Sen79107ORF20145P | |
| 20150 | S | S.Sen406ORFFP (100% identity) | S.Sen79107ORF20145P | |
| 20155 | R | Sen406ORFFP (100% identity) | Sen79107ORF20145P | |
| 20160 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | cell division protein DamX | |||
| 1795 | M | M.StyTDamP (100% identity) | GATC | M.Sen79107DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 domain-containing protein | |||
| 2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen79107ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 5615 | 146 aa hypothetical protein | |||
| 5620 | M | M.SenS38AORF18010P (100% identity) | M.Sen79107ORF5620P | |
| 5625 | 104 aa hypothetical protein | |||
| 5655 | GntR family transcriptional regulator | |||
| 5660 | M | M.SenCS16ORFGP (100% identity) | M.Sen79107ORF5660P | |
| 5665 | DNA cytosine methyltransferase | |||
| 5660 | phage N-6-adenine-methyltransferase | |||
| 5665 | M | M.SenL15ORF5555P (100% identity) | M.Sen79107ORF5665P | |
| 5670 | RusA family crossover junction | |||
| 9390 | phosphohydrolase | |||
| 9395 | M | M.Sen406DcmP (100% identity) | CCWGG | M.Sen79107DcmP |
| 9400 | V | V.StyUK1DcmP (100% identity) | V.Sen79107DcmP | |
| 9405 | drug/metabolite exporter YedA | |||
| 14950 | replication endonuclease | |||
| 14955 | M | M.Sen717ORF8505P (100% identity) | GATC | M.Sen79107ORF14955P |
| 14960 | TraR/DksA family transcriptional regulator | |||
| 20025 | DeoR family transcriptional regulator | |||
| 20030 | R | Sen717ORF13545P (99% identity) | Sen79107ORF20035P | |
| ??? | M | M.Sen717ORF13545P (100% identity) | M.Sen79107ORF20035P | |
| 20040 | DNA helicase | |||
| 21580 | LexA family transcriptional regulator | |||
| 21585 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen79107ORF21585P |
| 21590 | 330 aa hypothetical protein | |||
| 22710 | DUF262 domain-containing protein | |||
| 22715 | R | SspS13ORF1655P (100% identity) | Sen79107ORF22720P | |
| 22720 | M | M.SspS13ORF1655P (100% identity) | M.Sen79107ORF22720P | |
| 22725 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17500 | 33 aa hypothetical protein | |||
| 17505 | R | SenS051ORF18250P (100% identity) | CAGAG | Sen79107ORF17510P |
| 17510 | M | M.SenUA38ORF1080P (100% identity) | CAGAG | M.Sen79107ORF17510P |
| 17515 | MFS transporter | |||