Salmonella enterica CFSAN079094 |
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Putative Salmonella enterica CFSAN079094 RM systems
Ref: Hoffmann,M. and Sanchez,M. unpublished
REBASE ref # 29024
| Sequence length: | GenBank #: | |
| Chromosome: | 4,918,293 bp | CP042438 |
| plasmid pCFSAN079094: | 81,966 bp | CP042439 |
REBASE acronym: Sen79094
Org_num: 35667
All begin DA124_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20245 | restriction endonuclease | |||
| 20250 | R | SenWORF4635P (100% identity) | GAANNNNNNNNTCGC | Sen79094ORF20255P |
| 20255 | M | M.SenWORF4635P (100% identity) | GAANNNNNNNNTCGC | M.Sen79094ORF20255P |
| 20260 | S | S.SenWORF4635P (100% identity) | GAANNNNNNNNTCGC | S.Sen79094ORF20255P |
| 20265 | type I addiction module toxin, SymE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.StyTDamP (100% identity) | GATC | M.Sen79094DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 domain-containing protein | |||
| 2225 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen79094ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 9400 | PerC family transcriptional regulator | |||
| 9405 | M | M.SenWORF2003P (100% identity) | M.Sen79094ORF9405P | |
| 9410 | RusA family crossover junction | |||
| 13665 | drug/metabolite exporter YedA | |||
| 13670 | V | V.StyUK1DcmP (100% identity) | V.Sen79094DcmP | |
| 13675 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen79094DcmP |
| 13680 | phosphohydrolase | |||
| 16830 | protein ninD | |||
| 16835 | M | M.Sen47349ORF17765P (100% identity) | M.Sen79094ORF16835P | |
| 16840 | 140 aa hypothetical protein | |||
| 20735 | Crp/Fnr family transcriptional regulator | |||
| 20740 | M | M.EhoM1ORF15735P (100% identity) | M.Sen79094ORF20740P | |
| 20745 | R | EspDC4ORF2247P (99% identity) | Sen79094ORF20740P | |
| 20750 | anaerobic sulfatase maturase | |||
| 21730 | 921 aa hypothetical protein | |||
| 21735 | M | M.SenWORF4408P (100% identity) | M.Sen79094ORF21735P | |
| 21740 | GNAT family N-acetyltransferase | |||
| plasmid pCFSAN079094 | ||||
| 24330 | 73 aa hypothetical protein | |||
| 24335 | M | M.SenE3ORF1815P (100% identity) | M.Sen79094ORF24335P | |
| 24340 | DNA breaking-rejoining protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17965 | 33 aa hypothetical protein | |||
| 17970 | R | SenWC80ORFAP (99% identity) | CAGAG | Sen79094ORF17975P |
| 17975 | M | M.Sens770ORF9955P (100% identity) | CAGAG | M.Sen79094ORF17975P |
| 17980 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20240 | BrnT family toxin | |||
| 20245 | R | StyTMrrP (100% identity) | Sen79094MrrP | |
| 20250 | type I restriction-modification system | |||