Mannheimia haemolytica 22549 |
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Putative Mannheimia haemolytica 22549 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,689,760 bp
GenBank #: CP017519
REBASE acronym: Mha22549
Org_num: 37896
All begin BG610_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | methionine synthase | |||
| 3215 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha22549III |
| 3220 | type III restriction endonuclease subunit M | |||
| 3225 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha22549III | |
| 3230 | 211 aa hypothetical protein | |||
| 3215 | type I restriction endonuclease subunit M | |||
| 3220 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha22549ORF3215P |
| 3225 | restriction endonuclease subunit S | |||
| 8750 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha9ORFIP (97% identity) | GACNNNNNTTC | M.Mha22549II |
| 8765 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha22549II |
| 8770 | R | Mhas183ORF4955P (100% identity) | GACNNNNNTTC | Mha22549IIP |
| 8775 | bifunctional glutamine synthetase | |||
| 11775 | phosphatidylserine decarboxylase | |||
| 11780 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha22549IP |
| 11785 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha22549I |
| 11790 | transcriptional regulator | |||
| 11795 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha22549I |
| 11800 | integrase | |||
| 11805 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha22549IP |
| 11810 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha22549IV |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha22549IV |
| 1330 | 188 aa hypothetical protein | |||
| 3090 | adhesin | |||
| 3095 | M | M.Pba12565ORF10370P (100% identity) | M.Mha22549ORF3095P | |
| 3100 | S6 family igA-specific metalloendopeptidase | |||
| 4735 | 79 aa hypothetical protein | |||
| 4740 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha22549VI |
| 4745 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha22549VIP |
| 4750 | protein-transmembrane prediction | |||
| 5455 | 342 aa hypothetical protein | |||
| 5460 | M | M.Pba12565ORF4970P (100% identity) | M.Mha22549ORF5460P | |
| 5465 | replication protein | |||
| 5585 | 69 aa hypothetical protein | |||
| 5590 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha22549ORF5590P | |
| 5595 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha22549ORF5590P | |
| 5600 | 91 aa hypothetical protein | |||
| 7275 | 168 aa hypothetical protein | |||
| 7280 | M | M.Pba12565ORF7080P (100% identity) | M.Mha22549ORF7280P | |
| 7285 | DNA helicase | |||
| 7400 | 154 aa hypothetical protein | |||
| 7405 | M | M.Mhas183ORF7435P (100% identity) | M.Mha22549ORF7405P | |
| 7410 | 85 aa hypothetical protein | |||
| 9385 | 348 aa hypothetical protein | |||
| 9390 | M | M.Pba12565ORF4290P (100% identity) | M.Mha22549ORF9390P | |
| 9395 | IS481 family transposase | |||
| 10115 | sodium-dependent transporter | |||
| 10120 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha22549ORF10120P |
| 10125 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6710 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha183ORF11450P (100% identity) | M.Mha22549ORF6715P | |
| ??? | R | Pba12565ORF5515P (100% identity) | Mha22549ORF6715P | |
| 6735 | citrate (Si)-synthase | |||
| 8525 | DNA gyrase subunit B | |||
| 8530 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha22549VP |
| 8535 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha22549V |
| 8540 | 4-hydroxybenzoate polyprenyltransferase | |||