Mannheimia haemolytica 1609 |
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Putative Mannheimia haemolytica 1609 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,753,890 bp
GenBank #: CP017520
REBASE acronym: Mha1609
Org_num: 37895
All begin BG591_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | methionine synthase | |||
| 3225 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | M.Mha1609III |
| 3230 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1609III |
| 3235 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha1609III |
| 3240 | 211 aa hypothetical protein | |||
| 9195 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha99ORFJP (98% identity) | GACNNNNNTTC | M.Mha1609II |
| 9210 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha1609II |
| 9215 | R | Pba12565ORF4845P (100% identity) | GACNNNNNTTC | Mha1609IIP |
| 9220 | bifunctional glutamine synthetase | |||
| 12230 | phosphatidylserine decarboxylase | |||
| 12235 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1609IP |
| 12240 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1609I |
| 12245 | transcriptional regulator | |||
| 12250 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1609I |
| 12255 | integrase | |||
| 12260 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1609IP | |
| 12265 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1609IV |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1609IV |
| 1330 | 188 aa hypothetical protein | |||
| 3100 | adhesin | |||
| 3105 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1609ORF3105P | |
| 3110 | S6 family igA-specific metalloendopeptidase | |||
| 5660 | protein-transmembrane prediction | |||
| 5665 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1609VIP |
| 5670 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1609VI |
| 5675 | 79 aa hypothetical protein | |||
| 6465 | 85 aa hypothetical protein | |||
| 6470 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1609ORF6470P | |
| 6475 | 154 aa hypothetical protein | |||
| 6590 | DNA helicase | |||
| 6595 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1609ORF6595P | |
| 6600 | 168 aa hypothetical protein | |||
| 8325 | 168 aa hypothetical protein | |||
| 8330 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1609ORF8330P | |
| 8335 | DNA helicase | |||
| 8600 | 91 aa hypothetical protein | |||
| 8605 | M | M.Pba12565ORF6600P (100% identity) | M1.Mha1609ORF8605P | |
| 8610 | M | M.Pba12565ORF6605P (100% identity) | M2.Mha1609ORF8605P | |
| 8615 | 69 aa hypothetical protein | |||
| 8735 | replication protein | |||
| 8740 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1609ORF8740P | |
| 8745 | 342 aa hypothetical protein | |||
| 9835 | 348 aa hypothetical protein | |||
| 9840 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1609ORF9840P | |
| 9845 | IS481 family transposase | |||
| 10570 | sodium-dependent transporter | |||
| 10575 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1609ORF10575P |
| 10580 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7720 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mhas183ORF6680P (100% identity) | M.Mha1609ORF7725P | |
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1609ORF7725P | |
| 7745 | citrate (Si)-synthase | |||
| 8970 | DNA gyrase subunit B | |||
| 8975 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1609VP |
| 8980 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1609V |
| 8985 | 4-hydroxybenzoate polyprenyltransferase | |||