Mannheimia haemolytica 1582 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica 1582 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,640,172 bp
GenBank #: CP017523
REBASE acronym: Mha1582
Org_num: 37892
All begin BG606_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3060 | methionine synthase | |||
| 3065 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1582II |
| 3070 | type III restriction endonuclease subunit M | |||
| 3075 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1582II | |
| 3080 | 211 aa hypothetical protein | |||
| 3065 | type I restriction endonuclease subunit M | |||
| 3070 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1582ORF3065P |
| 3075 | restriction endonuclease subunit S | |||
| 8680 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha99ORFJP (93% identity) | M.Mha1582ORF8690P | |
| 8695 | S | S.PhaAI (100% identity) | S.Mha1582ORF8690P | |
| 8700 | R | Mhas183ORF4955P (100% identity) | Mha1582ORF8690P | |
| 8705 | bifunctional glutamine synthetase | |||
| 11485 | phosphatidylserine decarboxylase | |||
| 11490 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1582IP |
| 11495 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1582I |
| 11500 | transcriptional regulator | |||
| 11505 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1582I |
| 11510 | integrase | |||
| 11515 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1582IP | |
| 11520 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1582ORF1320P |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1582ORF1320P |
| 1330 | 188 aa hypothetical protein | |||
| 2940 | adhesin | |||
| 2945 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1582ORF2945P | |
| 2950 | S6 family igA-specific metalloendopeptidase | |||
| 4550 | 79 aa hypothetical protein | |||
| 4555 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1582III |
| 4560 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1582IIIP |
| 4565 | protein-transmembrane prediction | |||
| 6190 | 85 aa hypothetical protein | |||
| 6195 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1582ORF6195P | |
| 6200 | 154 aa hypothetical protein | |||
| 6315 | DNA helicase | |||
| 6320 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1582ORF6320P | |
| 6325 | 168 aa hypothetical protein | |||
| 8275 | 168 aa hypothetical protein | |||
| 8280 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1582ORF8280P | |
| 8285 | DNA helicase | |||
| 9090 | 348 aa hypothetical protein | |||
| 9095 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1582ORF9095P | |
| 9100 | IS481 family transposase | |||
| 9820 | sodium-dependent transporter | |||
| 9825 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1582ORF9825P |
| 9830 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6835 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha1512ORF7860P (100% identity) | M.Mha1582ORF6840P | |
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1582ORF6840P | |
| 6865 | citrate (Si)-synthase | |||
| 8455 | DNA gyrase subunit B | |||
| 8460 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1582ORF8465P |
| 8465 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1582ORF8465P |
| 8470 | 4-hydroxybenzoate polyprenyltransferase | |||