Mannheimia haemolytica 1576 |
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Putative Mannheimia haemolytica 1576 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,732,072 bp
GenBank #: CP017524
REBASE acronym: Mha1576
Org_num: 37891
All begin BG595_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3215 | methionine synthase | |||
| 3220 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1576III |
| 3225 | type III restriction endonuclease subunit M | |||
| 3230 | S | S2.Mhas184ORF2820P (99% identity) | S2.Mha1576III | |
| 3235 | 211 aa hypothetical protein | |||
| 3220 | type I restriction endonuclease subunit M | |||
| 3225 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1576ORF3220P |
| 3230 | restriction endonuclease subunit S | |||
| 9005 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha6ORFJP (100% identity) | GACNNNNNTTC | M.Mha1576II |
| 9020 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha1576II |
| 9025 | R | Pba12565ORF4845P (100% identity) | GACNNNNNTTC | Mha1576IIP |
| 9030 | bifunctional glutamine synthetase | |||
| 12025 | phosphatidylserine decarboxylase | |||
| 12030 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1576IP |
| 12035 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1576I |
| 12040 | transcriptional regulator | |||
| 12045 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1576IP |
| 12050 | integrase | |||
| 12055 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1576I | |
| 12060 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1576V |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1576V |
| 1330 | 188 aa hypothetical protein | |||
| 3095 | 234 aa hypothetical protein | |||
| 3100 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1576ORF3100P | |
| 3105 | S6 family igA-specific metalloendopeptidase | |||
| 4750 | 79 aa hypothetical protein | |||
| 4755 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1576IV |
| 4760 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1576IVP |
| 4765 | protein-transmembrane prediction | |||
| 8105 | 342 aa hypothetical protein | |||
| 8110 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1576ORF8110P | |
| 8115 | replication protein | |||
| 8235 | 69 aa hypothetical protein | |||
| 8240 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1576ORF8240P | |
| 8245 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1576ORF8240P | |
| 8250 | 91 aa hypothetical protein | |||
| 8515 | DNA helicase | |||
| 8520 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1576ORF8520P | |
| 8525 | 168 aa hypothetical protein | |||
| 9645 | 348 aa hypothetical protein | |||
| 9650 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1576ORF9650P | |
| 9655 | IS481 family transposase | |||
| 10375 | sodium-dependent transporter | |||
| 10380 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1576ORF10380P |
| 10385 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6985 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1576ORF7000P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha1576ORF7000P | |
| 7010 | DNA methylase N-4/N-6 | |||
| 8780 | DNA gyrase subunit B | |||
| 8785 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1576ORF8790P |
| 8790 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1576ORF8790P |
| 8795 | 4-hydroxybenzoate polyprenyltransferase | |||