Mannheimia haemolytica 1532 |
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Putative Mannheimia haemolytica 1532 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,644,838 bp
GenBank #: CP017530
REBASE acronym: Mha1532
Org_num: 37885
All begin BG599_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3045 | bifunctional glutamate--cysteine | |||
| 3050 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha1532IP |
| 3055 | integrase | |||
| 3060 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1532I |
| 3065 | transcriptional regulator | |||
| 3070 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha1532I |
| 3075 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha1532IP |
| 3080 | phosphatidylserine decarboxylase | |||
| 5865 | bifunctional glutamine synthetase | |||
| 5870 | R | Mhas183ORF4955P (100% identity) | Mha1532ORF5880P | |
| 5875 | S | S.PhaAI (100% identity) | S.Mha1532ORF5880P | |
| 5880 | M | M.Mha1560II (100% identity) | M.Mha1532ORF5880P | |
| 5885 | methyltransferase | |||
| 11420 | 211 aa hypothetical protein | |||
| 11425 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1532IIP | |
| 11430 | S | S1.Mhas183ORF10615P (99% identity) | CAACNNNNNTC | S1.Mha1532II |
| 11435 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1532II |
| 11440 | methionine synthase | |||
| 11425 | restriction endonuclease subunit S | |||
| 11430 | S | S1.Mhas183ORF10615P (99% identity) | CAACNNNNGT | S.Mha1532ORF11435P |
| 11435 | type I restriction endonuclease subunit M | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1532ORF1325P |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1532ORF1325P |
| 1335 | 188 aa hypothetical protein | |||
| 4735 | 3-dehydroquinate synthase | |||
| 4740 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1532ORF4740P |
| 4745 | sodium-dependent transporter | |||
| 5465 | IS481 family transposase | |||
| 5470 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1532ORF5470P | |
| 5475 | 348 aa hypothetical protein | |||
| 6520 | DNA helicase | |||
| 6525 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1532ORF6525P | |
| 6530 | 168 aa hypothetical protein | |||
| 8195 | 168 aa hypothetical protein | |||
| 8200 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1532ORF8200P | |
| 8205 | DNA helicase | |||
| 8320 | 154 aa hypothetical protein | |||
| 8325 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1532ORF8325P | |
| 8330 | 85 aa hypothetical protein | |||
| 9895 | protein-transmembrane prediction | |||
| 9900 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1532IIIP |
| 9905 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1532III |
| 9910 | 79 aa hypothetical protein | |||
| 11550 | S6 family igA-specific metalloendopeptidase | |||
| 11555 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1532ORF11555P | |
| 11560 | adhesin | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6105 | methyltransferase | |||
| 6110 | M | M.Pba12565ORF6755P (23% identity) | M.Mha1532ORF6110AP | |
| 6115 | IS200/IS605 family transposase | |||
| 6120 | transposase | |||
| 6125 | M | M.Pba12565ORF6755P (76% identity) | M.Mha1532ORF6110BP | |
| 6130 | R | Pba12565ORF6755P (100% identity) | Mha1532ORF6110P | |
| 6135 | DNA gyrase subunit B | |||
| 7115 | citrate (Si)-synthase | |||
| ??? | R | MhaPORFJP (100% identity) | Mha1532ORF7130P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha1532ORF7130P | |
| 7140 | trimethylamine N-oxide reductase I catalytic | |||