Mannheimia haemolytica 1342 |
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Putative Mannheimia haemolytica 1342 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,700,997 bp
GenBank #: CP017546
REBASE acronym: Mha1342
Org_num: 37869
All begin BG592_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3230 | methionine synthase | |||
| 3235 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1342II |
| 3240 | S | S1.MhaGHORF8210P (100% identity) | CAACNNNNGT | S1.Mha1342II |
| 3245 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1342II | |
| 3250 | 211 aa hypothetical protein | |||
| 9095 | adenine methyltransferase | |||
| ??? | M | M.MhaH23ORF2958P (100% identity) | M.Mha1342ORF9100P | |
| 9105 | S | S.PhaAI (100% identity) | S.Mha1342ORF9100P | |
| 9110 | R | Mhas183ORF4955P (100% identity) | Mha1342ORF9100P | |
| 9115 | bifunctional glutamine synthetase | |||
| 11890 | phosphatidylserine decarboxylase | |||
| 11895 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha1342IP |
| 11900 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha1342I |
| 11905 | transcriptional regulator | |||
| 11910 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1342I |
| 11915 | integrase | |||
| 11920 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha1342IP |
| 11925 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1342III |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1342III |
| 1335 | 188 aa hypothetical protein | |||
| 3110 | adhesin | |||
| 3115 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1342ORF3115P | |
| 3120 | S6 family igA-specific metalloendopeptidase | |||
| 4760 | 79 aa hypothetical protein | |||
| 4765 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1342IV |
| 4770 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1342IVP |
| 4775 | protein-transmembrane prediction | |||
| 6500 | 85 aa hypothetical protein | |||
| 6505 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1342ORF6505P | |
| 6510 | 154 aa hypothetical protein | |||
| 6625 | DNA helicase | |||
| 6630 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1342ORF6630P | |
| 6635 | 168 aa hypothetical protein | |||
| 8485 | 91 aa hypothetical protein | |||
| 8490 | M | M.Pba12565ORF6600P (100% identity) | M1.Mha1342ORF8490P | |
| 8495 | M | M.Pba12565ORF6605P (100% identity) | M2.Mha1342ORF8490P | |
| 8500 | 69 aa hypothetical protein | |||
| 8620 | replication protein | |||
| 8625 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1342ORF8625P | |
| 8630 | 342 aa hypothetical protein | |||
| 9500 | 348 aa hypothetical protein | |||
| 9505 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1342ORF9505P | |
| 9510 | IS481 family transposase | |||
| 10230 | sodium-dependent transporter | |||
| 10235 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1342ORF10235P |
| 10240 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7230 | IS481 family transposase | |||
| ??? | R | Mha6055ORFAP (100% identity) | Mha1342ORF7245P | |
| 7245 | DNA methylase N-4/N-6 domain-containing protein | |||
| 7250 | M | M.Mha32635ORF6845P (58% identity) | M.Mha1342ORF7245P | |
| 7255 | DNA methylase N-4/N-6 | |||
| 8860 | DNA gyrase subunit B | |||
| 8865 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1342ORF8870P |
| 8870 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1342ORF8870P |
| 8875 | methyltransferase | |||