Mannheimia haemolytica 1319 |
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Putative Mannheimia haemolytica 1319 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,788,085 bp
GenBank #: CP017548
REBASE acronym: Mha1319
Org_num: 37867
All begin BG580_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3225 | methionine synthase | |||
| 3230 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | M.Mha1319II |
| 3235 | S | S1.MhaGHORF8210P (100% identity) | CAACNNNNNTC | S1.Mha1319II |
| 3240 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha1319II |
| 3245 | 211 aa hypothetical protein | |||
| 8845 | ANT(3)-Ia family aminoglycoside | |||
| 8850 | M | M.Mha1503ORF8815P (100% identity) | M.Mha1319ORF8850P | |
| 8855 | tetracycline efflux MFS transporter Tet(H) | |||
| 9400 | methyltransferase | |||
| ??? | M | M.MhaH23ORF2958P (100% identity) | TGAANNNNNTTC | M.Mha1319III |
| 9410 | S | S.PhaAI (100% identity) | TGAANNNNNTTC | S.Mha1319III |
| 9415 | R | Pba12565ORF4845P (100% identity) | TGAANNNNNTTC | Mha1319IIIP |
| 9420 | bifunctional glutamine synthetase | |||
| 12430 | phosphatidylserine decarboxylase | |||
| 12435 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1319IP |
| 12440 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1319I |
| 12445 | transcriptional regulator | |||
| 12450 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1319I |
| 12455 | integrase | |||
| 12460 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1319IP | |
| 12465 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1319ORF1325P |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1319ORF1325P |
| 1335 | 188 aa hypothetical protein | |||
| 3105 | adhesin | |||
| 3110 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1319ORF3110P | |
| 3115 | S6 family igA-specific metalloendopeptidase | |||
| 4765 | 79 aa hypothetical protein | |||
| 4770 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1319ORF4770P |
| 4775 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1319ORF4770P |
| 4780 | protein-transmembrane prediction | |||
| 5485 | 342 aa hypothetical protein | |||
| 5490 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1319ORF5490P | |
| 5495 | replication protein | |||
| 5615 | 69 aa hypothetical protein | |||
| 5620 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1319ORF5620P | |
| 5625 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1319ORF5620P | |
| 5630 | 91 aa hypothetical protein | |||
| 5940 | DNA helicase | |||
| 5945 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1319ORF5945P | |
| 5950 | 168 aa hypothetical protein | |||
| 7675 | 168 aa hypothetical protein | |||
| 7680 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1319ORF7680P | |
| 7685 | DNA helicase | |||
| 7800 | 154 aa hypothetical protein | |||
| 7805 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1319ORF7805P | |
| 7810 | 85 aa hypothetical protein | |||
| 10040 | 348 aa hypothetical protein | |||
| 10045 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1319ORF10045P | |
| 10050 | IS481 family transposase | |||
| 10770 | sodium-dependent transporter | |||
| 10775 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1319ORF10775P |
| 10780 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6530 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1319ORF6545P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha1319ORF6545P | |
| 6555 | trimethylamine N-oxide reductase I catalytic | |||
| 9165 | DNA gyrase subunit B | |||
| 9170 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1319ORF9175P |
| 9175 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1319ORF9175P |
| 9180 | adenine methyltransferase | |||