Mannheimia haemolytica 1309 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica 1309 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,746,074 bp
GenBank #: CP017550
REBASE acronym: Mha1309
Org_num: 37865
All begin BG589_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3045 | bifunctional glutamate--cysteine | |||
| 3050 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1309IP | |
| 3055 | integrase | |||
| 3060 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1309I |
| 3065 | transcriptional regulator | |||
| 3070 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1309I |
| 3075 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1309IP |
| 3080 | phosphatidylserine decarboxylase | |||
| 6085 | bifunctional glutamine synthetase | |||
| 6090 | R | Pba12565ORF4845P (100% identity) | Mha1309ORF6100P | |
| 6095 | S | S.PhaAI (100% identity) | S.Mha1309ORF6100P | |
| ??? | M | M.Mhas183ORF4955P (95% identity) | M.Mha1309ORF6100P | |
| 6105 | 125 aa hypothetical protein | |||
| 12015 | 211 aa hypothetical protein | |||
| 12020 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1309II | |
| 12025 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNGT | S1.Mha1309II |
| 12030 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1309II |
| 12035 | methionine synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1309III |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1309III |
| 1330 | 188 aa hypothetical protein | |||
| 4730 | 3-dehydroquinate synthase | |||
| 4735 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1309ORF4735P |
| 4740 | sodium-dependent transporter | |||
| 5460 | IS481 family transposase | |||
| 5465 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1309ORF5465P | |
| 5470 | 348 aa hypothetical protein | |||
| 7495 | 85 aa hypothetical protein | |||
| 7500 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1309ORF7500P | |
| 7505 | 154 aa hypothetical protein | |||
| 7620 | DNA helicase | |||
| 7625 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1309ORF7625P | |
| 7630 | 168 aa hypothetical protein | |||
| 9325 | 342 aa hypothetical protein | |||
| 9330 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1309ORF9330P | |
| 9335 | replication protein | |||
| 9455 | 69 aa hypothetical protein | |||
| 9460 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1309ORF9460P | |
| 9465 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1309ORF9460P | |
| 9470 | 91 aa hypothetical protein | |||
| 9745 | DNA helicase | |||
| 9750 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1309ORF9750P | |
| 9755 | 168 aa hypothetical protein | |||
| 10490 | protein-transmembrane prediction | |||
| 10495 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1309IVP |
| 10500 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1309IV |
| 10505 | 79 aa hypothetical protein | |||
| 12145 | S6 family igA-specific metalloendopeptidase | |||
| 12150 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1309ORF12150P | |
| 12155 | 234 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6320 | methyltransferase | |||
| 6325 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1309ORF6325P |
| 6330 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1309ORF6325P |
| 6335 | DNA gyrase subunit B | |||
| 8760 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha1582ORF6840P (100% identity) | M.Mha1309ORF8765P | |
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1309ORF8765P | |
| 8790 | citrate (Si)-synthase | |||