Dickeya species NCPPB 569 |
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Putative Dickeya species NCPPB 569 RM systems
Ref: Duprey,A. et al. Environ. Microbiol. (2019) In press
REBASE ref # 29668
Complete sequence: 4,317,154 bp
GenBank #: CP042220
REBASE acronym: DspB569
Org_num: 37657
All begin Dpoa569_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 703 | tRNA dihydrouridine(20/20a) synthase DusA | |||
| 704 | S | S.Dsp569ORFGP (100% identity) | S.DspB569ORF706P | |
| 705 | R | R1.CinsI46ORF1900P (54% identity) | DspB569ORF706P | |
| 706 | M | M.Dsp569ORFGP (100% identity) | M.DspB569ORF706P | |
| 707 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 378 | SPOR domain-containing protein | |||
| 379 | M | M.Dsp569ORFHP (100% identity) | GATC | M.DspB569Dam2P |
| 380 | ribulose-phosphate 3-epimerase | |||
| 1404 | type II toxin-antitoxin system RelE/ParE family | |||
| 1405 | M | M.Dsp569ORFFP (100% identity) | M.DspB569ORF1405P | |
| 1406 | 109 aa hypothetical protein | |||
| 1407 | replication endonuclease | |||
| 1408 | M | M.Dsp569ORFEP (100% identity) | M.DspB569ORF1408P | |
| 1409 | TraR/DksA family transcriptional regulator | |||
| 3453 | 89 aa hypothetical protein | |||
| 3454 | M | M.Dsp569ORFAP (100% identity) | M.DspB569ORF3454P | |
| 3455 | R | Dsp569ORFAP (100% identity) | DspB569ORF3454P | |
| 3456 | serine acetyltransferase | |||
| 3512 | MFS transporter | |||
| 3513 | R | Dsp569ORFBP (100% identity) | DspB569ORF3514P | |
| 3514 | M | M.Dsp569ORFBP (100% identity) | M.DspB569ORF3514P | |
| 3515 | V | V.Dsp569ORFBP (100% identity) | V.DspB569ORF3514P | |
| 3516 | amino acid transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3425 | type II toxin-antitoxin system toxin CcdB | |||
| 3426 | M | M.Dsp569ORFDP (100% identity) | M.DspB569ORF3426P | |
| 3427 | R | Dsp569ORFDP (100% identity) | DspB569ORF3426P | |
| 3428 | restriction endonuclease | |||
| 3427 | restriction endonuclease subunit R | |||
| 3428 | R | Dsp569ORFCP (100% identity) | DspB569ORF3429P | |
| 3429 | M | M.Dsp569ORFCP (97% identity) | M.DspB569ORF3429P | |
| 3430 | site-specific integrase | |||