Pectobacterium carotovorum subsp. carotovorum 67 |
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Putative Pectobacterium carotovorum subsp. carotovorum 67 RM systems
Ref: Li,M.F. et al. unpublished
REBASE ref # 28972
Complete sequence: 4,909,824 bp
GenBank #: CP034211
REBASE acronym: Pca67
Org_num: 35544
All begin EGD00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16835 | chromosome segregation protein SMC | |||
| 16840 | S | S.KspCRPORF24400P (70% identity) | GAAYNNNNNNRTCC | S.Pca67II |
| 16845 | M | M.Sen24522ORF4760P (97% identity) | GAAYNNNNNNRTCC | M.Pca67II |
| 16850 | 490 aa hypothetical protein | |||
| 19865 | M48 family peptidase | |||
| 19870 | R | DdaS31ORF12245P (91% identity) | ACAGNNNNNCTT | Pca67IP |
| 19875 | hydroxyacid dehydrogenase | |||
| 19880 | S | S.Sfo411I (54% identity) | ACAGNNNNNCTT | S.Pca67I |
| 19885 | M | M.Daq1742ORF502P (95% identity) | ACAGNNNNNCTT | M.Pca67I |
| 19890 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1945 | SPOR domain-containing protein | |||
| 1950 | M | M.Pca19972DamP (100% identity) | GATC | M.Pca67Dam |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 21520 | YicC family protein | |||
| 21525 | M | M.Pbr239ORF20780P (96% identity) | M.Pca67ORF21525P | |
| 21530 | V | V.Pbr239ORF20780P (87% identity) | V.Pca67ORF21525P | |
| 21535 | R | Pca14AORF730P (85% identity) | Pca67ORF21525P | |
| 21540 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8460 | 61 aa hypothetical protein | |||
| 8465 | R | Pca67IIIP (100% identity) | AGACC | Pca67ORF8470P |
| 8470 | M | M.Kpn968ORF27065P (97% identity) | AGACC | M.Pca67ORF8470P |
| 8475 | 94 aa hypothetical protein | |||
| 14575 | 94 aa hypothetical protein | |||
| ??? | M | M.Pca67ORF8470P (94% identity) | AGACC | M.Pca67III |
| 14585 | R | Pca67ORF8470P (100% identity) | AGACC | Pca67IIIP |
| 14590 | 61 aa hypothetical protein | |||