Planctomycetes bacterium CA12 |
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Putative Planctomycetes bacterium CA12 RM systems
Ref: Wiegand,S. et al. unpublished
REBASE ref # 29516
Complete sequence: 5,475,215 bp
GenBank #: CP036265
REBASE acronym: PbaCA12
Org_num: 37295
All begin CA12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11470 | HNH endonuclease | |||
| 11480 | R | PbaMal65ORF52490P (65% identity) | PbaCA12ORF11520P | |
| 11490 | 274 aa hypothetical protein | |||
| 11500 | 75 aa hypothetical protein | |||
| 11510 | S | S.PbaPan110ORF55080P (43% identity) | S.PbaCA12ORF11520P | |
| 11520 | M | M.BspJ211ORF12105P (73% identity) | M.PbaCA12ORF11520P | |
| 11530 | Transposase IS116/IS110/IS902 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | Formamidopyrimidine-DNA glycosylase | |||
| 130 | M | M.PbaMal4ORF57960P (49% identity) | M.PbaCA12ORF130P | |
| 140 | 82 aa hypothetical protein | |||
| 200 | Metallopeptidase family M24 | |||
| 210 | M | M.OcyMTP1ORFEP (65% identity) | M.PbaCA12ORF210P | |
| 220 | Septum site-determining protein MinD | |||
| 6880 | CBS domain protein | |||
| 6890 | RM | PbaPan181ORF29370P (47% identity) | PbaCA12ORF6890P | |
| 6900 | RNA polymerase-associated protein RapA | |||
| 12160 | Signal transduction histidine-protein kinase | |||
| 12170 | V | V.Aya1095ORFBP (41% identity) | V.PbaCA12ORF12180P | |
| 12180 | M | Zfo19928ORFJP (53% identity) | M.PbaCA12ORF12180P | |
| 12190 | Dual specificity phosphatase, catalytic domain | |||
| 28920 | 152 aa hypothetical protein | |||
| 28930 | M | M.Xca17DndAP (48% identity) | M.PbaCA12DndAP | |
| 28940 | 389 aa hypothetical protein | |||
| 28930 | Cysteine desulfurase | |||
| 28940 | M | M.GurRDndBP (46% identity) | M.PbaCA12DndBP | |
| 28950 | 549 aa hypothetical protein | |||
| 28940 | 389 aa hypothetical protein | |||
| 28950 | M | M.Ama005DndCP (51% identity) | M.PbaCA12DndCP | |
| 28960 | chromosome segregation protein | |||
| 28950 | 549 aa hypothetical protein | |||
| 28960 | M | M.Kqi151DndDP (35% identity) | M.PbaCA12DndDP | |
| 28970 | 137 aa hypothetical protein | |||
| 28960 | chromosome segregation protein | |||
| 28970 | M | M.RulUC8DndEP (45% identity) | M.PbaCA12DndEP | |
| 28980 | AIPR protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18260 | 1078 aa hypothetical protein | |||
| 18270 | M | M.Bdi7ORF4035P (42% identity) | M.PbaCA12ORF18270P | |
| 18280 | 75 aa hypothetical protein | |||