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Putative Lactobacillus paracasei NJ RM systems
Ref: Cai,Y. unpublished
REBASE ref # 29514
Complete sequence: 3,083,412 bp
GenBank #: CP041944
REBASE acronym: LpaNJ
Org_num: 37292
All begin FO269_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
11645 | 188 aa hypothetical protein | |||
11650 | R | LpaXI3ORFBP (100% identity) | LpaNJORF11655P | |
11655 | M | M.LpaXI3ORFBP (100% identity) | M.LpaNJORF11655P | |
11660 | S | S1.LpaOF10ORF5340P (100% identity) | S1.LpaNJORF11655P | |
11665 | site-specific integrase | |||
11670 | S | S1.LpaST2ORF3180P (100% identity) | S2.LpaNJORF11655P | |
11675 | DUF262 domain-containing protein | |||
12340 | glutamine-hydrolyzing GMP synthase | |||
12345 | M | M.LpaOF10ORF5960P (100% identity) | M.LpaNJORF12345P | |
12350 | S | S.LpaOF10ORF5960P (100% identity) | S.LpaNJORF12345P | |
12355 | R | LpaOF10ORF5960P (100% identity) | LpaNJORF12345P | |
12360 | nucleotidyltransferase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3805 | IS5 family transposase | |||
3810 | R | LpaOF10ORF12795P (100% identity) | LpaNJORF3815P | |
3815 | M | M.Lpl16ORF12P (98% identity) | M.LpaNJORF3815P | |
3820 | recombinase family protein | |||
9115 | 73 aa hypothetical protein | |||
9120 | M | M.LpaOF10ORF3015P (100% identity) | M.LpaNJORF9120P | |
9125 | 108 aa hypothetical protein | |||
12430 | 115 aa hypothetical protein | |||
12435 | M | M.LpaXI3ORFCP (98% identity) | M.LpaNJORF12435P | |
12440 | helix-turn-helix transcriptional regulator |