Ornithinimicrobium species H23M54 |
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Putative Ornithinimicrobium species H23M54 RM systems
Ref: Bae,J.-W. and Lee,S.-Y. unpublished
REBASE ref # 27876
Complete sequence: 4,092,907 bp
GenBank #: CP041616
REBASE acronym: OspM54
Org_num: 37074
All begin FNH13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | TnsA-like heteromeric transposase endonuclease | |||
| 1065 | R | Asp190ORF5645P (93% identity) | TCANNNNNNNNTCGA | OspM54IP |
| 1070 | S | S.MspTY81ORF48810P (44% identity) | TCANNNNNNNNTCGA | S.OspM54I |
| 1075 | M | M.Asp190ORF5645P (93% identity) | TCANNNNNNNNTCGA | M.OspM54I |
| 1080 | GIY-YIG nuclease family protein | |||
| 15380 | GIY-YIG nuclease family protein | |||
| 15385 | R | Osp270ORF13705P (90% identity) | GCGANNNNNATC | OspM54IIP |
| 15390 | S | S.Mma44163ORF8670P (32% identity) | GCGANNNNNATC | S.OspM54II |
| 15395 | M | M.Osp270ORF13705P (93% identity) | GCGANNNNNATC | M.OspM54II |
| 15400 | 639 aa hypothetical protein | |||
| 17675 | 76 aa hypothetical protein | |||
| 17680 | M | M.SspHY006ORFAP (82% identity) | GAANNNNNNNRTCG | M.OspM54III |
| 17685 | S | S.PspHDW11ORF11220P (31% identity) | GAANNNNNNNRTCG | S.OspM54III |
| 17690 | R | SspHY006ORFAP (82% identity) | GAANNNNNNNRTCG | OspM54IIIP |
| 17695 | 181 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7190 | IS3 family transposase | |||
| 7195 | R | Osp1793ORF6235P (80% identity) | OspM54ORF7195P | |
| 7200 | 75 aa hypothetical protein | |||