Escherichia coli 69 |
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Putative Escherichia coli 69 RM systems
Ref: Song,W. unpublished
REBASE ref # 29278
| Sequence length: | GenBank #: | |
| Chromosome: | 5,215,259 bp | CP041522 |
| plasmid p6007-1: | 92,869 bp | CP041523 |
| plasmid p6007-2: | 78,313 bp | CP041524 |
| plasmid p6007-3: | 31,500 bp | CP041525 |
REBASE acronym: Ecos69
Org_num: 36660
All begin FNJ83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1120 | endoribonuclease SymE | |||
| 1125 | S | S.Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | S.Ecos69ORF1130P |
| 1130 | M | M.Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | M.Ecos69ORF1130P |
| 1135 | R | Ecoo241ORF21620P (99% identity) | AACNNNNNNGTGC | Ecos69ORF1130P |
| 1140 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8455 | recombination protein NinB | |||
| 8460 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Ecos69ORF8460P |
| 8465 | NinE family protein | |||
| 13135 | drug/metabolite exporter YedA | |||
| 13140 | V | V.Ecostr9DcmP (74% identity) | V.Ecos69DcmP | |
| 13145 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Ecos69DcmP |
| 13150 | phosphohydrolase | |||
| 20885 | DNA-binding transcriptional regulator Fis | |||
| 20890 | M | M.Ecoo241ORF2420P (100% identity) | ATGCAT | M.Ecos69ORF20890P |
| 20895 | DUF2556 domain-containing protein | |||
| 21420 | ribulose-phosphate 3-epimerase | |||
| 21425 | M | M.Ecoo241DamP (100% identity) | GATC | M.Ecos69DamP |
| 21430 | cell division protein DamX | |||
| plasmid p6007-1 | ||||
| 26405 | 0 aa hypothetical protein | |||
| 26410 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Ecos69ORF26410P |
| 26415 | 73 aa hypothetical protein | |||
| plasmid p6007-2 | ||||
| 26760 | 73 aa hypothetical protein | |||
| 26765 | M | M.Ecos19ORF24850P (100% identity) | M.Ecos69ORF26765P | |
| 26770 | 102 aa hypothetical protein | |||
| plasmid p6007-3 | ||||
| 27090 | IS1 family transposase | |||
| 27095 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecos69ORF27095P |
| 27100 | R | YpsR2ORFAP (100% identity) | CCWGG | Ecos69ORF27095P |
| 27105 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1110 | R | SenHNK130McrCP (100% identity) | Ecos69McrCP | |
| 1115 | R | SenHNK130McrBP (100% identity) | Ecos69McrBP | |
| 1120 | endoribonuclease SymE | |||
| 1135 | type I restriction-modification system | |||
| 1140 | R | Ssp28760MrrP (100% identity) | Ecos69MrrP | |
| 1145 | GTPase | |||