Escherichia coli O1:H42 CLSC36 |
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Putative Escherichia coli O1:H42 CLSC36 RM systems
Ref: Desloges,I. et al. unpublished
REBASE ref # 28965
Complete sequence: 5,083,072 bp
GenBank #: CP041300
REBASE acronym: EcoCLSC36
Org_num: 36788
All begin FK541_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4865 | IS66 family transposase | |||
| 4870 | M | M.SenSI170ORF3660P (100% identity) | M.EcoCLSC36ORF4870P | |
| 4875 | AAA family ATPase | |||
| 4880 | S | S2.SenSI170ORF3660P (100% identity) | S.EcoCLSC36ORF4870P | |
| 4885 | 61 aa hypothetical protein | |||
| 4890 | R | SenSI170ORF3660P (99% identity) | EcoCLSC36ORF4870P | |
| 4895 | IS3 family transposase | |||
| 11330 | IS3 family transposase | |||
| 11335 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoCLSC36ORF11335P |
| 11340 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoCLSC36ORF11335P |
| 11345 | YecA family protein | |||
| 11350 | cold shock domain-containing protein | |||
| 11355 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | EcoCLSC36ORF11335P |
| 11360 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | cell division protein DamX | |||
| 3275 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCLSC36DamP |
| 3280 | ribulose-phosphate 3-epimerase | |||
| 3805 | DUF2556 domain-containing protein | |||
| 3810 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoCLSC36ORF3810P |
| 3815 | DNA-binding transcriptional regulator Fis | |||
| 11065 | phosphohydrolase | |||
| 11070 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoCLSC36DcmP |
| 11075 | V | V.Ecos142DcmP (100% identity) | V.EcoCLSC36DcmP | |
| 11080 | drug/metabolite exporter YedA | |||
| 22065 | RM | EcoZ30ORF19095P (100% identity) | EcoCLSC36ORF22065P | |
| 22070 | DEAD/DEAH box helicase | |||
| 22105 | HNH endonuclease | |||
| 22110 | R | Ecoppa2ORF12035P (100% identity) | EcoCLSC36ORF22110P | |
| 22115 | 332 aa hypothetical protein | |||
| 24275 | 345 aa hypothetical protein | |||
| 24280 | M | M.EcosE2ORF21575P (100% identity) | M.EcoCLSC36ORF24280P | |
| 24285 | 68 aa hypothetical protein | |||