Helicobacter suis SNTW101c |
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Putative Helicobacter suis SNTW101c RM systems
Ref: Rimbara,E. et al. unpublished
REBASE ref # 29145
| Sequence length: | GenBank #: | |
| Chromosome: | 1,680,021 bp | AP019774 |
| plasmid pSNTW101c_1: | 9,051 bp | AP019775 |
REBASE acronym: Hsu101c
Org_num: 36143
All begin SNTW_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7660 | 3-deoxy-D-manno-octulosonate 8-phosphate | |||
| 7670 | R | Hsu4022ORF4640P (100% identity) | Hsu101cORF7690P | |
| 7680 | S | S.Hsu101ORFKP (100% identity) | S.Hsu101cORF7690P | |
| 7690 | M | M.Hsu101ORFKP (97% identity) | M.Hsu101cORF7690P | |
| 7700 | Outer membrane protein | |||
| 9820 | 82 aa hypothetical protein | |||
| 9830 | S | S.Hsu4022ORF7850P (98% identity) | S.Hsu101cORF9840P | |
| ??? | M | M.Hsu101ORFDP (100% identity) | M.Hsu101cORF9840P | |
| 9860 | S-ribosylhomocysteine lyase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1190 | 85 aa hypothetical protein | |||
| ??? | M | M.Hsu4022ORF1200P (100% identity) | M.Hsu101cORF1200P | |
| 1220 | 287 aa hypothetical protein | |||
| 1350 | selenocysteine-specific translation elongation | |||
| 1360 | M | M.HsuHS1ORF1490P (100% identity) | M.Hsu101cORF1360P | |
| 1370 | 299 aa hypothetical protein | |||
| 1400 | Glucose-6-phosphate isomerase Pgi | |||
| 1410 | RM | Hsu101ORFUP (98% identity) | Hsu101cORF1410P | |
| 1420 | 142 aa hypothetical protein | |||
| 2150 | 1-deoxy-D-xylulose-5-phosphate synthase Dxs | |||
| 2160 | M | M.Hsu101ORFQP (100% identity) | M.Hsu101cORF2160P | |
| 2170 | 638 aa hypothetical protein | |||
| 2240 | 68 aa hypothetical protein | |||
| 2250 | M | M.Hsu101ORFRP (100% identity) | M.Hsu101cORF2250P | |
| 2260 | Phosphatidylglycerophosphatase A PgpA | |||
| 2830 | bifunctional NAD(P)H-hydrate repair enzyme Nnr | |||
| 2840 | M | M.Hsu4022ORF2850P (100% identity) | M.Hsu101cORF2840P | |
| 2850 | R | Hsu0020ORF2300P (100% identity) | Hsu101cORF2840P | |
| 2860 | 256 aa hypothetical protein | |||
| 3690 | 53 aa hypothetical protein | |||
| 3700 | M | M.Hsu101ORFIP (85% identity) | M.Hsu101cORF3700P | |
| 3710 | 134 aa hypothetical protein | |||
| 7380 | 239 aa hypothetical protein | |||
| 7390 | R | Hsu4022ORF4350P (100% identity) | Hsu101cORF7400P | |
| 7400 | M | M.Hsu4022ORF4350P (99% identity) | M.Hsu101cORF7400P | |
| 7410 | polyisoprenoid-binding protein | |||
| 7540 | methyl-accepting chemotaxis sensory transducer | |||
| 7550 | M | HsuHS1ORF9820P (100% identity) | M.Hsu101cORF7550P | |
| 7560 | S | S1.HsuHS1ORF9820P (88% identity) | S1.Hsu101cORF7550P | |
| 7570 | S | S2.HsuHS1ORF9820P (100% identity) | S2.Hsu101cORF7550P | |
| 7580 | 68 aa hypothetical protein | |||
| 8960 | 39 aa hypothetical protein | |||
| 8970 | M | M.HsuHS1ORF4820P (100% identity) | M.Hsu101cORF8970P | |
| 8980 | 129 aa hypothetical protein | |||
| 10630 | 110 aa hypothetical protein | |||
| 10640 | M | M.Hsu101ORFSP (100% identity) | M.Hsu101cORF10640P | |
| 10650 | 766 aa hypothetical protein | |||
| 11100 | 193 aa hypothetical protein | |||
| 11110 | M | M.HsuHS1ORF3730P (100% identity) | M.Hsu101cORF11110P | |
| 11120 | fumarate hydratase class II | |||
| 11220 | shikimate kinase | |||
| 11240 | M | M1.Hsu0020ORF6620P (100% identity) | M1.Hsu101cORF11240P | |
| 11250 | M | M2.HsuHS1ORF9300P (100% identity) | M2.Hsu101cORF11240P | |
| 11260 | R | Hsu101ORFVP (100% identity) | Hsu101cORF11240P | |
| 11270 | phosphate acetyltransferase | |||
| 13950 | NADPH dehydrogenase | |||
| 13960 | M | M.Hsu101ORFEP (100% identity) | M.Hsu101cORF13960P | |
| 13970 | R | 109 aa hypothetical protein | Hsu101cORF13960P | |
| 13980 | membrane protein | |||
| 15780 | 324 aa hypothetical protein | |||
| 15790 | R | Hsu101ORFAP (100% identity) | Hsu101cORF15800P | |
| 15800 | M | M.HsuHS1ORF7680P (100% identity) | M.Hsu101cORF15800P | |
| 15810 | shikimate dehydrogenase (NADP(+)) | |||
| 16920 | 770 aa hypothetical protein | |||
| 16930 | M | M.HsuHS1ORF18000P (100% identity) | M.Hsu101cORF16930P | |
| 16940 | molybdenum cofactor guanylyltransferase | |||
| plasmid pSNTW101c_1 | ||||
| 17350 | 802 aa hypothetical protein | |||
| 17360 | M | M2.Hpy4003ORF17440P (100% identity) | M1.Hsu101cORF17360P | |
| 17370 | M | M2.Hpy4004ORF17710P (100% identity) | M2.Hsu101cORF17360P | |
| 17380 | R | Hpy4004ORF17710P (100% identity) | Hsu101cORF17360P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1060 | HIT-like protein | |||
| 1070 | M | M.Hsu0020ORF1070P (100% identity) | M.Hsu101cORF1070P | |
| 1080 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16740 | alginate lyase | |||
| 16750 | R | HsuHS1McrCP (100% identity) | Hsu101cMcrCP | |
| 16760 | R | HsuHS1McrBP (100% identity) | Hsu101cMcrBP | |
| 16770 | 101 aa hypothetical protein | |||