Salmonella enterica subsp. enterica serovar Typhimurium 10ST07093 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium 10ST07093 RM systems
Ref: Hiley,L. unpublished
REBASE ref # 29040
| Sequence length: | GenBank #: | |
| Chromosome: | 4,865,212 bp | CP029839 |
| plasmid p10ST07093A: | 93,657 bp | CP029837 |
| plasmid p10ST07093B: | 93,798 bp | CP029838 |
REBASE acronym: Sen7093
Org_num: 35721
All begin DM286_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25775 | endoribonuclease SymE | |||
| 25780 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen7093ORF25785P |
| 25785 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen7093ORF25785P |
| 25790 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen7093ORF25785P |
| 25795 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11745 | drug/metabolite exporter YedA | |||
| 11750 | V | V.StyUK1DcmP (100% identity) | V.Sen7093DcmP | |
| 11755 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen7093DcmP |
| 11760 | phosphohydrolase | |||
| 12000 | RusA family crossover junction | |||
| 12005 | M | M.StyUK1V (100% identity) | GATC | M.Sen7093ORF12005P |
| 12010 | PerC family transcriptional regulator | |||
| 16080 | 70 aa hypothetical protein | |||
| 16085 | M | M.SenSTm9ORF23047P (100% identity) | M.Sen7093ORF16085P | |
| 16090 | DUF2732 family protein | |||
| 19745 | Fis family transcriptional regulator | |||
| 19750 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen7093ORF19750P |
| 19755 | DUF2556 domain-containing protein | |||
| 20255 | ribulose-phosphate 3-epimerase | |||
| 20260 | M | M.StyTDamP (100% identity) | GATC | M.Sen7093DamP |
| 20265 | SPOR domain-containing protein | |||
| 25605 | ATP-binding protein | |||
| 25610 | RM | SenSTm9ORF21385P (100% identity) | GATCAG | Sen7093ORF25610P |
| 25615 | BREX system P-loop protein BrxC | |||
| plasmid p10ST07093A | ||||
| 540 | 0 aa hypothetical protein | |||
| 545 | M | M.StyR64ORFAP (100% identity) | M.Sen7093ORF545P | |
| 550 | 73 aa hypothetical protein | |||
| plasmid p10ST07093B | ||||
| 775 | 73 aa hypothetical protein | |||
| 780 | M | M.StyUK1ORFAP (100% identity) | M.Sen7093ORF780P | |
| 785 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3100 | MFS transporter | |||
| 3105 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen7093ORF3105P |
| 3110 | R | StyUK1IP (99% identity) | CAGAG | Sen7093ORF3105P |
| 3115 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25790 | type I restriction-modification system | |||
| 25795 | R | StyUK1MrrP (100% identity) | Sen7093MrrP | |
| 25800 | BrnT family toxin | |||