Helicobacter pylori 5-A-EK1 |
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Putative Helicobacter pylori 5-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,596,986 bp
GenBank #: CP032913
REBASE acronym: Hpy5AEK1
Org_num: 34993
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpySWT14ORF7455P (95% identity) | S.Hpy5AEK1ORFA1P | |
| ??? | M | M.HpyKH33ORFLP (95% identity) | M.Hpy5AEK1ORFA1P | |
| ??? | R | HpySP413VIP (89% identity) | Hpy5AEK1ORFA1P | |
| ??? | S | S.HpyL006ORF2110P (89% identity) | S.Hpy5AEK1ORFUP | |
| ??? | M | M.HpyJ182ORF3270P (96% identity) | M.Hpy5AEK1ORFUP | |
| ??? | R | HpyNP02ORF2085P (89% identity) | Hpy5AEK1ORFUP | |
| ??? | S | S.Hpy5AEK1ORFNP (99% identity) | S.Hpy5AEK1ORFOP | |
| ??? | R | HpyLI13ORF4490P (95% identity) | Hpy5AEK1ORFNP | |
| ??? | S | S.Hpy5AEK1ORFOP (99% identity) | S.Hpy5AEK1ORFNP | |
| ??? | M | M.HpyP003ORF3915P (95% identity) | M.Hpy5AEK1ORFNP | |
| ??? | S | S.HpyU005ORF7090P (53% identity) | S.Hpy5AEK1ORFHP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 969 aa hypothetical protein | |||
| ??? | RM | Hpy3sORF55P (83% identity) | Hpy5AEK1ORFGP | |
| ??? | RM | HpyF008ORF6835P (97% identity) | Hpy5AEK1ORFC1P | |
| ??? | S | S.HpySW17ORF6875P (37% identity) | S1.Hpy5AEK1ORFC1P | |
| ??? | S | S.Hpy380ORF3015P (28% identity) | S2.Hpy5AEK1ORFC1P | |
| ??? | M | M.HpyG003VII (97% identity) | TGCA | M.Hpy5AEK1ORFB1P |
| ??? | R | HpyGRE039XP (98% identity) | TGCA | Hpy5AEK1ORFB1P |
| ??? | M | M1.HpyIS5IV (99% identity) | CCTC | M1.Hpy5AEK1ORFZP |
| ??? | M | M2.HpyPE110VIIP (98% identity) | CCTC | M2.Hpy5AEK1ORFZP |
| ??? | R | HpyI028XP (97% identity) | GATC | Hpy5AEK1ORFAP |
| ??? | M | M.HpySP01VIII (95% identity) | GATC | M.Hpy5AEK1ORFAP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | R1.HpyLI20ORF870P (99% identity) | R1.Hpy5AEK1ORFYP | |
| ??? | R | R2.HpyLI20ORF870P (99% identity) | R2.Hpy5AEK1ORFYP | |
| ??? | M | DNA cytosine methyltransferase | M.Hpy5AEK1ORFXP | |
| ??? | AAA family ATPase | |||
| ??? | M | M.HpyKH12ORFPP (97% identity) | TCGA | M.Hpy5AEK1ORFVP |
| ??? | type II R-M system restriction endonuclease | |||
| ??? | DNA -methyltransferase | |||
| ??? | R | Hpy94ORF1490P (94% identity) | Hpy5AEK1ORFWP | |
| ??? | M | M.HpyPO02ORF5190P (96% identity) | M.Hpy5AEK1ORFWP | |
| ??? | M | M.HpyI029V (97% identity) | ATTAAT | M.Hpy5AEK1ORFRP |
| ??? | DNA adenine methylase | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyNG17II (97% identity) | ACNGT | M.Hpy5AEK1ORFSP |
| ??? | R | HpySP504IIP (100% identity) | ACNGT | Hpy5AEK1ORFSP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.HpyL024ORF4170P (99% identity) | ACGT | M.Hpy5AEK1ORFTP |
| ??? | R | HpyKH25ORFWP (99% identity) | ACGT | Hpy5AEK1ORFTP |
| ??? | M | M.HpyGCT27ORF1545P (97% identity) | M.Hpy5AEK1ORFQP | |
| ??? | R | HpyKH19ORFFP (95% identity) | Hpy5AEK1ORFQP | |
| ??? | RM | HpyPOR112ORF3185P (87% identity) | Hpy5AEK1ORFPP | |
| ??? | R | HpyKA1ORF2295P (91% identity) | GTNNAC | Hpy5AEK1ORFBP |
| ??? | M | M.HpyJ182ORF5590P (92% identity) | GTNNAC | M.Hpy5AEK1ORFBP |
| ??? | M | M.HpyI016ORF5240P (99% identity) | TCNNGA | M.Hpy5AEK1ORFCP |
| ??? | R | HpyLI08IXP (99% identity) | TCNNGA | Hpy5AEK1ORFCP |
| ??? | M | M.HpySW08XIV (96% identity) | GCGC | M.Hpy5AEK1ORFDP |
| ??? | M | M.HpyP104XIII (99% identity) | TCNGA | M.Hpy5AEK1ORFEP |
| ??? | R | HpyF17I (100% identity) | TCNGA | Hpy5AEK1ORFEP |
| ??? | M | M.HpySP204I (97% identity) | CATG | M.Hpy5AEK1ORFMP |
| ??? | R | Hpy478AORFPP (95% identity) | CATG | Hpy5AEK1ORFMP |
| ??? | RM | HpyP105ORF6210P (88% identity) | Hpy5AEK1ORFLP | |
| ??? | R | HpyL004VIP (98% identity) | GAAGA | Hpy5AEK1ORFJP |
| ??? | M | M1.HpyLI10V (98% identity) | GAAGA | M1.Hpy5AEK1ORFJP |
| ??? | M | M2.HpySWT04XIII (95% identity) | M2.Hpy5AEK1ORFJP | |
| ??? | hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpyfe21ORF40P (94% identity) | M.Hpy5AEK1ORFFP | |
| ??? | R | HpyJO3ORF7370P (93% identity) | Hpy5AEK1ORFFP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | DUF1887 family protein | |||
| ??? | M | M.HpyT010ORF6585P (95% identity) | M.Hpy5AEK1ORFKP | |
| ??? | M | M.HpyGRE043ORF6715P (94% identity) | M.Hpy5AEK1ORFIP | |
| ??? | R | HpySWT11XVP (91% identity) | Hpy5AEK1ORFIP | |