Helicobacter pylori 13-A-EK8 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter pylori 13-A-EK8 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,619,300 bp
GenBank #: CP032912
REBASE acronym: Hpy13AEK8
Org_num: 34968
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyL014ORF4275P (96% identity) | S.Hpy13AEK8ORFVP | |
| ??? | R | HpyGE7ORF4110P (97% identity) | Hpy13AEK8ORFUP | |
| ??? | S | S.HpyL006XIII (95% identity) | S.Hpy13AEK8ORFUP | |
| ??? | M | M.HpyL008ORF2395P (80% identity) | M.Hpy13AEK8ORFUP | |
| ??? | R | HpySP18XIIP (91% identity) | Hpy13AEK8ORFOP | |
| ??? | M | M.HpyI024ORF2190P (95% identity) | M.Hpy13AEK8ORFOP | |
| ??? | S | S.HpyME09ORF2335P (97% identity) | S.Hpy13AEK8ORFOP | |
| ??? | R | HpyGE5IIIP (98% identity) | Hpy13AEK8ORFLP | |
| ??? | M | M.Hpy19CORFKP (95% identity) | M.Hpy13AEK8ORFLP | |
| ??? | S | S.Hpy5009ORF1190P (97% identity) | S.Hpy13AEK8ORFLP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | HpyCOL3ORF6910P (90% identity) | Hpy13AEK8ORFE1P | |
| ??? | R | HpyGE7IVP (94% identity) | Hpy13AEK8ORFAP | |
| ??? | M | Dam family site-specific DNA--methyltransferase | M1.Hpy13AEK8ORFAP | |
| ??? | M | M1.HpyPE11VII (98% identity) | CCATC | M2.Hpy13AEK8ORFAP |
| ??? | RM | Hpy26AEK1ORFYP (99% identity) | Hpy13AEK8ORFBP | |
| ??? | S | S.HpyGRE042ORF7190P (62% identity) | S.Hpy13AEK8ORFBP | |
| ??? | RM | HpySW10ORF6695P (89% identity) | Hpy13AEK8ORFZP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | hypothetical protein | |||
| ??? | M | M.HpyBGR3VII (98% identity) | GANTC | M.Hpy13AEK8ORFA1P |
| ??? | R | HpyR04ORF6605P (97% identity) | GANTC | Hpy13AEK8ORFA1P |
| ??? | hypothetical protein | |||
| ??? | R | HpyF015ORF5075P (58% identity) | Hpy13AEK8ORFYP | |
| ??? | M | M.HpyQ35ORFWP (99% identity) | M.Hpy13AEK8ORFYP | |
| ??? | M | M.Hpy26AEK1ORFBP (99% identity) | CATG | M.Hpy13AEK8ORFCP |
| ??? | R | HpyNCI14VIIIP (98% identity) | TCNGA | Hpy13AEK8ORFDP |
| ??? | M | M.HpyISR6XIII (99% identity) | TCNGA | M.Hpy13AEK8ORFDP |
| ??? | M | M.HpyF011XVII (96% identity) | M.Hpy13AEK8ORFEP | |
| ??? | R | HpyP004XIP (100% identity) | TCNNGA | Hpy13AEK8ORFFP |
| ??? | M | M.HpyPE119XIII (100% identity) | TCNNGA | M.Hpy13AEK8ORFFP |
| ??? | RM | HpyMM12ORF3155P (84% identity) | Hpy13AEK8ORFWP | |
| ??? | R | HpyF013IXP (92% identity) | Hpy13AEK8ORFTP | |
| ??? | M | M.HpyU302IX (91% identity) | M.Hpy13AEK8ORFTP | |
| ??? | R | HpyNCI25ORFA1P (95% identity) | GTAC | Hpy13AEK8ORFSP |
| ??? | M | M.Hpy201097ORF6700P (97% identity) | GTAC | M.Hpy13AEK8ORFSP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | HpySW12IXP (99% identity) | ACNGT | Hpy13AEK8ORFQP |
| ??? | M | M.HpyLI35IX (99% identity) | ACNGT | M.Hpy13AEK8ORFQP |
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyP007ORF2325P (45% identity) | M.Hpy13AEK8ORFPP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.HpyGE15ORF4470P (98% identity) | ATTAAT | M.Hpy13AEK8ORFRP |
| ??? | M | M.HpyNP09V (100% identity) | CCGG | M.Hpy13AEK8ORFHP |
| ??? | R | Hpy381FORFFP (84% identity) | CCGG | Hpy13AEK8ORFHP |
| ??? | DNA -methyltransferase | |||
| ??? | 188 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.HpyU008IX (98% identity) | TCGA | M.Hpy13AEK8ORFIP |
| ??? | M | 149 aa hypothetical protein | M1.Hpy13AEK8ORFJP | |
| ??? | M | 150 aa hypothetical protein | M2.Hpy13AEK8ORFJP | |
| ??? | R | HpyGE2IXP (94% identity) | Hpy13AEK8ORFJP | |
| ??? | M | M1.HpyT001IV (99% identity) | CCTC | M1.Hpy13AEK8ORFMP |
| ??? | M | M2.HpyBGR1VP (98% identity) | CCTC | M2.Hpy13AEK8ORFMP |
| ??? | R | HpyNCI49XIIP (92% identity) | CCTC | Hpy13AEK8ORFMP |
| ??? | 419 aa hypothetical protein | |||
| ??? | restriction endonuclease | |||
| ??? | R | Hpy20AORFKP (98% identity) | CCTTC | Hpy13AEK8ORFNP |
| ??? | M | M.Hpy20AORFKP (97% identity) | CCTTC | M.Hpy13AEK8ORFNP |
| ??? | R | HpyC61IIP (99% identity) | TGCA | Hpy13AEK8ORFKP |
| ??? | M | M.HpyP108XII (98% identity) | TGCA | M.Hpy13AEK8ORFKP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyI027ORF7165P (96% identity) | M.Hpy13AEK8ORFD1P | |
| ??? | R | HpyISR10ORF7280P (92% identity) | Hpy13AEK8ORFD1P | |
| ??? | 1260 aa hypothetical protein | |||
| ??? | R | Hpy19CORFIP (91% identity) | Hpy13AEK8ORFC1P | |
| ??? | M | M.HpyC010ORF335P (96% identity) | M.Hpy13AEK8ORFC1P | |
| ??? | R | HpyCOL109ORF6955P (91% identity) | Hpy13AEK8ORFB1P | |
| ??? | M | M.HpySP806ORF6485P (92% identity) | M.Hpy13AEK8ORFB1P | |
| ??? | M | hypothetical protein | M.Hpy13AEK8ORFXP | |
| ??? | restriction endonuclease | |||
| ??? | R | HpyGORF553P (95% identity) | Hpy13AEK8ORFGP | |
| ??? | M | M.HpyPR06XVI (89% identity) | M.Hpy13AEK8ORFGP | |