Helicobacter pylori 20-A-EK1 |
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Putative Helicobacter pylori 20-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,599,658 bp
GenBank #: CP032910
REBASE acronym: Hpy20A
Org_num: 34974
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyN6ORFEP (95% identity) | Hpy20AORFQP | |
| ??? | S | S.HpyGE20ORF2695P (64% identity) | S.Hpy20AORFQP | |
| ??? | M | M.HpyPE119XV (89% identity) | M.Hpy20AORFQP | |
| ??? | R | HpyIN5ORF2140P (88% identity) | Hpy20AORFNP | |
| ??? | M | M.HpyLIM3ORF2160P (96% identity) | M.Hpy20AORFNP | |
| ??? | S | S.HpySW05ORF2225P (98% identity) | S.Hpy20AORFNP | |
| ??? | R | HpyI015ORF7275P (96% identity) | Hpy20AORFJP | |
| ??? | M | M.HpyP102ORF7540P (95% identity) | M.Hpy20AORFJP | |
| ??? | S | S.HpyU415ORF7325P (97% identity) | S.Hpy20AORFJP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | HpyGE16ORF7485P (91% identity) | Hpy20AORFZP | |
| ??? | R | HpyGE7IVP (87% identity) | CCATC | Hpy20AORFAP |
| ??? | M | M2.HpyLI01VI (93% identity) | CCATC | M2.Hpy20AORFAP |
| ??? | M | M2.HpyP108III (98% identity) | CCATC | M1.Hpy20AORFAP |
| ??? | RM | HpyR10ORF7145P (98% identity) | Hpy20AORFXP | |
| ??? | S | S1.HpySP11ORF7170P (93% identity) | S1.Hpy20AORFXP | |
| ??? | S | S.HpyR09ORF7315P (43% identity) | S2.Hpy20AORFXP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M2.HpySP314VII (95% identity) | M1.Hpy20AORFWP | |
| ??? | M | M2.HpySP304XVIII (96% identity) | M2.Hpy20AORFWP | |
| ??? | R | Hpy26AEK1ORFWP (97% identity) | Hpy20AORFWP | |
| ??? | RM | HpyME28ORF6330P (90% identity) | Hpy20AORFUP | |
| ??? | R | Hpy030XIIIP (72% identity) | Hpy20AORFCP | |
| ??? | M | M.Hpy476CORFDP (98% identity) | M.Hpy20AORFCP | |
| ??? | R | Hpy21FORFWP (70% identity) | CATG | Hpy20AORFTP |
| ??? | M | M.HpySW04I (98% identity) | CATG | M.Hpy20AORFTP |
| ??? | M | M.HpySWT07XVII (94% identity) | M.Hpy20AORFDP | |
| ??? | R | HpyCOL119XIP (98% identity) | Hpy20AORFSP | |
| ??? | M | M.HpyJO10XIII (98% identity) | M.Hpy20AORFSP | |
| ??? | RM | HpyGE3ORF3350P (89% identity) | Hpy20AORFRP | |
| ??? | R | HpyNP03VIIIP (98% identity) | GTNNAC | Hpy20AORFFP |
| ??? | M | M.HpyMTT79ORFFP (98% identity) | GTNNAC | M.Hpy20AORFFP |
| ??? | R | HpyQ35ORFOP (96% identity) | GTAC | Hpy20AORFGP |
| ??? | M | M.HpyG8GORFVP (98% identity) | GTAC | M.Hpy20AORFGP |
| ??? | M | DNA cytosine methyltransferase | M.Hpy20AORFOP | |
| ??? | hypothetical protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | M | M.Hpy13ORF2375P (97% identity) | M.Hpy20AORFPP | |
| ??? | M | M.HpyU004IV (100% identity) | CCGG | M.Hpy20AORFHP |
| ??? | R | HpyP009IVP (97% identity) | CCGG | Hpy20AORFHP |
| ??? | M | M.HpySP210VII (97% identity) | GATC | M.Hpy20AORFMP |
| ??? | R | HpyPO101VP (95% identity) | GATC | Hpy20AORFMP |
| ??? | M | M.HpyGE12V (98% identity) | CCTTC | M.Hpy20AORFKP |
| ??? | R | HpyGE12VP (99% identity) | CCTTC | Hpy20AORFKP |
| ??? | restriction endonuclease | |||
| ??? | 419 aa hypothetical protein | |||
| ??? | R | HpyKH14ORFKP (91% identity) | CCTC | Hpy20AORFLP |
| ??? | M | M2.HpyI002VIP (99% identity) | CCTC | M2.Hpy20AORFLP |
| ??? | M | M1.HpyL020XIII (98% identity) | CCTC | M1.Hpy20AORFLP |
| ??? | R | HpyGE15XIP (98% identity) | TGCA | Hpy20AORFIP |
| ??? | M | M.HpyLI29XIV (97% identity) | TGCA | M.Hpy20AORFIP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpySP13ORF6995P (96% identity) | M.Hpy20AORFYP | |
| ??? | R | HpyP008ORF6860P (95% identity) | Hpy20AORFYP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | HpyIR9XIIIP (90% identity) | Hpy20AORFBP | |
| ??? | M | M.HpyC010ORF335P (96% identity) | M.Hpy20AORFBP | |
| ??? | R | HpyL009ORF6655P (87% identity) | Hpy20AORFVP | |
| ??? | M | M.HpyH1XI (94% identity) | M.Hpy20AORFVP | |
| ??? | hypothetical protein | |||
| ??? | R | Hpy26AEK1ORFPP (95% identity) | Hpy20AORFEP | |
| ??? | M | M.HpyMTT60ORFPP (96% identity) | M.Hpy20AORFEP | |