Helicobacter pylori 24-A-EK1 |
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Putative Helicobacter pylori 24-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,659,500 bp
GenBank #: CP032907
REBASE acronym: Hpy24A
Org_num: 34978
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyBR17III (97% identity) | S.Hpy24AORFXP | |
| ??? | M | M.HpySP306ORF7570P (95% identity) | M.Hpy24AORFXP | |
| ??? | R | HpyF006XVP (94% identity) | Hpy24AORFXP | |
| ??? | S | S.HpyI001XIV (92% identity) | S.Hpy24AORFRP | |
| ??? | M | M.HpyP001ORF2260P (96% identity) | M.Hpy24AORFRP | |
| ??? | R | Hpy9310ORFA1P (90% identity) | Hpy24AORFRP | |
| ??? | S | S.Hpyfe114ORF4310P (96% identity) | S.Hpy24AORFNP | |
| ??? | R | HpySP03XP (95% identity) | Hpy24AORFFP | |
| ??? | S | S.HpyL012X (96% identity) | S.Hpy24AORFFP | |
| ??? | M | M.HpyGE13ORF3895P (96% identity) | M.Hpy24AORFFP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy102ORF7685P (88% identity) | Hpy24AORFB1P | |
| ??? | R | HpySW17ORF7020P (96% identity) | Hpy24AORFAP | |
| ??? | DNA -methyltransferase | |||
| ??? | endonuclease | |||
| ??? | M | M.Hpyfe83ORF135P (100% identity) | M.Hpy24AORFBP | |
| ??? | RM | HpyCOL210ORF7100P (98% identity) | Hpy24AORFZP | |
| ??? | S | S.HpyBR17ORF7060P (49% identity) | S1.Hpy24AORFZP | |
| ??? | S | S.HpySP107ORF7065P (47% identity) | S2.Hpy24AORFZP | |
| ??? | M | M.HpyNP03XI (99% identity) | TGCA | M.Hpy24AORFYP |
| ??? | R | HpyI019VIIIP (100% identity) | TGCA | Hpy24AORFYP |
| ??? | M | M1.HpyU436IV (98% identity) | CCTC | M1.Hpy24AORFVP |
| ??? | M | M1.HpyS299III (98% identity) | CCTC | M2.Hpy24AORFVP |
| ??? | R | HpyF004IXP (91% identity) | CCTC | Hpy24AORFVP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | restriction endonuclease | |||
| ??? | M | M.HpyB8ORF1517P (99% identity) | GTSAC | M.Hpy24AORFWP |
| ??? | R | Hpy26AEK1ORFJP (97% identity) | GTSAC | Hpy24AORFWP |
| ??? | M | M.Hpy207ORF7490P (97% identity) | GATC | M.Hpy24AORFCP |
| ??? | DNA -methyltransferase | |||
| ??? | M | DNA -methyltransferase | M.Hpy24AORFUP | |
| ??? | M | M.HpyG63ORFLP (96% identity) | TCGA | M.Hpy24AORFTP |
| ??? | DNA -methyltransferase | |||
| ??? | R | Hpy25AEK9ORFGP (68% identity) | CTNAG | Hpy24AORFSP |
| ??? | M | M.HpyU004IX (98% identity) | CTNAG | M.Hpy24AORFSP |
| ??? | M | M.HpySP101ORF4505P (99% identity) | M.Hpy24AORFDP | |
| ??? | M | M.HpyDO1II (96% identity) | ATTAAT | M.Hpy24AORFPP |
| ??? | modification methylase VspI domain protein | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyMTT60ORFKP (45% identity) | M.Hpy24AORFQP | |
| ??? | M | M.HpyGCT56ORFHP (97% identity) | GTAC | M.Hpy24AORFEP |
| ??? | R | HpyH012IVP (63% identity) | GTAC | Hpy24AORFEP |
| ??? | RM | HpyGCT97ORF5105P (88% identity) | Hpy24AORFOP | |
| ??? | R | Hpy280AORFEP (94% identity) | GTNNAC | Hpy24AORFGP |
| ??? | M | M.HpySP709IX (92% identity) | GTNNAC | M.Hpy24AORFGP |
| ??? | M | M.HpyT001X (98% identity) | M.Hpy24AORFMP | |
| ??? | R | HpyKH6ORFD1P (98% identity) | Hpy24AORFMP | |
| ??? | M | M.HpyL010XV (88% identity) | GCGC | M.Hpy24AORFHP |
| ??? | M | M.HpyIS6I (96% identity) | M.Hpy24AORFLP | |
| ??? | R | HpyBR15IP (93% identity) | Hpy24AORFLP | |
| ??? | RM | HpyK262ORF7560P (89% identity) | Hpy24AORFKP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyBR15ORF7145P (97% identity) | M.Hpy24AORFA1P | |
| ??? | R | HpyGRE043ORF7300P (94% identity) | Hpy24AORFA1P | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | M | M.HpyBR17ORF6620P (93% identity) | M.Hpy24AORFIP | |
| ??? | R | Hpy479C2ORFRP (94% identity) | Hpy24AORFIP | |
| ??? | M | M.Hpy13AEK8ORFC1P (95% identity) | M.Hpy24AORFJP | |
| ??? | R | HpyT014ORF6710P (91% identity) | Hpy24AORFJP | |