Helicobacter pylori 169-A-EK5 |
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Putative Helicobacter pylori 169-A-EK5 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,610,187 bp
GenBank #: CP032904
REBASE acronym: Hpy169A
Org_num: 34969
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy169CORFPP (100% identity) | S.Hpy169AORFPP | |
| ??? | M | M.Hpy169CORFPP (100% identity) | M.Hpy169AORFPP | |
| ??? | R | HpyP005ORF2310P (92% identity) | Hpy169AORFPP | |
| ??? | S | S.Hpy169CORFKP (100% identity) | S.Hpy169AORFKP | |
| ??? | R | Hpy169CORFJP (100% identity) | Hpy169AORFJP | |
| ??? | S | S.Hpy169CORFJP (100% identity) | S.Hpy169AORFJP | |
| ??? | M | M.Hpy169CORFJP (100% identity) | M.Hpy169AORFJP | |
| ??? | R | HsdR family type I site-specific deoxyribonuclease | Hpy169AORFGP | |
| ??? | M | M.Hpy169CORFGP (100% identity) | M.Hpy169AORFGP | |
| ??? | S | S.Hpy169CORFGP (100% identity) | S.Hpy169AORFGP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy169CORFXP (100% identity) | Hpy169AORFYP | |
| ??? | R | Hpy169CORFAP (100% identity) | CCATC | Hpy169AORFAP |
| ??? | M | M2.Hpy169CORFAP (100% identity) | CCATC | M2.Hpy169AORFAP |
| ??? | M | M1.Hpy169CORFAP (100% identity) | CCATC | M1.Hpy169AORFAP |
| ??? | R | HpySW33ORF1320P (100% identity) | Hpy169AORFVP | |
| ??? | M | M.Hpy169CORFRP (100% identity) | M.Hpy169AORFVP | |
| ??? | restriction endonuclease subunit S | |||
| ??? | DNA -methyltransferase | |||
| ??? | S | S.HpyBR13ORF7190P (51% identity) | S.Hpy169AORFWP | |
| ??? | R | Hpy169CORFVP (100% identity) | GAATTC | Hpy169AORFTP |
| ??? | M | M.Hpy169CORFVP (100% identity) | GAATTC | M.Hpy169AORFTP |
| ??? | M | M.Hpy169CORFTP (100% identity) | TGCA | M.Hpy169AORFSP |
| ??? | R | Hpy169CORFTP (100% identity) | TGCA | Hpy169AORFSP |
| ??? | M | M1.Hpy169CORFQP (100% identity) | CCTC | M1.Hpy169AORFQP |
| ??? | M | M2.Hpy169CORFQP (99% identity) | M2.Hpy169AORFQP | |
| ??? | R | Hpy169CORFBP (100% identity) | GATC | Hpy169AORFBP |
| ??? | M | M.Hpy169CORFBP (100% identity) | GATC | M.Hpy169AORFBP |
| ??? | R | Hpy169CORFCP (100% identity) | CCGG | Hpy169AORFCP |
| ??? | M | M.Hpy169CORFCP (100% identity) | CCGG | M.Hpy169AORFCP |
| ??? | M | M.Hpy169CORFNP (100% identity) | ATTAAT | M.Hpy169AORFNP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.Hpy169CORFOP (100% identity) | M.Hpy169AORFOP | |
| ??? | R | Hpy169CORFOP (100% identity) | Hpy169AORFOP | |
| ??? | RM | Hpy169CORFLAP (100% identity) | Hpy169AORFLAP | |
| ??? | RM | DEAD/DEAH box helicase | Hpy169AORFLBP | |
| ??? | R | Hpy169CORFDP (100% identity) | GTNNAC | Hpy169AORFDP |
| ??? | M | M.Hpy169CORFDP (100% identity) | GTNNAC | M.Hpy169AORFDP |
| ??? | M | M.Hpy169CORFIP (100% identity) | TCNNGA | M.Hpy169AORFIP |
| ??? | R | HpyL035ORF5140P (100% identity) | TCNNGA | Hpy169AORFIP |
| ??? | M | M.Hpy169CORFEP (100% identity) | M.Hpy169AORFEP | |
| ??? | M | M.Hpy169CORFFP (99% identity) | CATG | M.Hpy169AORFFP |
| ??? | RM | Hpy169CORFHP (100% identity) | Hpy169AORFHP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy169CORFWP (99% identity) | M.Hpy169AORFXP | |
| ??? | R | Hpy169CORFWP (100% identity) | Hpy169AORFXP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | Hpy169CORFUP (98% identity) | Hpy169AORFUP | |
| ??? | M | M.Hpy169CORFUP (100% identity) | M.Hpy169AORFUP | |
| ??? | R | Hpy169CORFSP (100% identity) | Hpy169AORFRP | |
| ??? | M | M.Hpy169CORFSP (100% identity) | M.Hpy169AORFRP | |
| ??? | R | Hpy169CORFMP (100% identity) | Hpy169AORFMP | |
| ??? | M | M.HpyI022ORF2840P (95% identity) | M.Hpy169AORFMP | |