Helicobacter pylori 280-A-EK1 |
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Putative Helicobacter pylori 280-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,609,437 bp
GenBank #: CP032902
REBASE acronym: Hpy280A
Org_num: 34982
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyKG10ORF2200P (98% identity) | S.Hpy280AORFBP | |
| ??? | M | M.HpyL033ORF2300P (94% identity) | M.Hpy280AORFBP | |
| ??? | R | HpyISR6ORF2170P (90% identity) | Hpy280AORFBP | |
| ??? | S | S.HpyMM05ORF4020P (96% identity) | S.Hpy280AORFOP | |
| ??? | R | HpySWT14ORF2450P (96% identity) | Hpy280AORFDP | |
| ??? | S | S.HpyL022III (94% identity) | S.Hpy280AORFDP | |
| ??? | M | M.HpyKH1ORFLP (90% identity) | M.Hpy280AORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | HpyP004ORF6905P (93% identity) | Hpy280AORFD1P | |
| ??? | RM | HpyU003ORF7120P (94% identity) | Hpy280AORFB1P | |
| ??? | S | S1.HpyK044ORF855P (93% identity) | S1.Hpy280AORFB1P | |
| ??? | S | S2.HpyB147ORF280P (83% identity) | S2.Hpy280AORFB1P | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M2.HpyU204VIII (95% identity) | M1.Hpy280AORFZP | |
| ??? | M | M2.HpyNCI26IIP (99% identity) | M2.Hpy280AORFZP | |
| ??? | R | HpyIS4VIP (97% identity) | Hpy280AORFZP | |
| ??? | RM | HpyGRE042ORF6480P (64% identity) | RM1.Hpy280AORFWP | |
| ??? | RM | adenine specific DNA methyltransferase | RM2.Hpy280AORFWP | |
| ??? | hypothetical protein | |||
| ??? | adenine specific DNA methyltransferase | |||
| ??? | M | M.Hpyoh1ORF1670P (87% identity) | M.Hpy280AORFXP | |
| ??? | R | Hpy13AEK8ORFA1P (97% identity) | Hpy280AORFXP | |
| ??? | R | HpyL023ORF6255P (87% identity) | Hpy280AORFVP | |
| ??? | M | M.HpyQ35ORFWP (99% identity) | M.Hpy280AORFVP | |
| ??? | R | Hpy381FORFWP (94% identity) | CATG | Hpy280AORFUP |
| ??? | M | M.Hpy381FORFWP (99% identity) | CATG | M.Hpy280AORFUP |
| ??? | M | M.HpySW07XII (94% identity) | M.Hpy280AORFAP | |
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyGE16II (100% identity) | ACNGT | M.Hpy280AORFSP |
| ??? | R | Hpy381FORFRP (99% identity) | ACNGT | Hpy280AORFSP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | M | M.HpyR01II (98% identity) | ATTAAT | M.Hpy280AORFRP |
| ??? | DNA adenine methylase | |||
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.HpySW16ORF3615P (44% identity) | M.Hpy280AORFTP | |
| ??? | M | M.HpyKH6ORFHP (96% identity) | M.Hpy280AORFQP | |
| ??? | R | Hpy479CORFEP (96% identity) | Hpy280AORFQP | |
| ??? | RM | DEAD/DEAH box helicase | Hpy280AORFPAP | |
| ??? | RM | DEAD/DEAH box helicase | Hpy280AORFPBP | |
| ??? | R | HpyL031XP (91% identity) | GTNNAC | Hpy280AORFEP |
| ??? | M | M.HpySW36XI (91% identity) | GTNNAC | M.Hpy280AORFEP |
| ??? | M | M.HpyID9ORF4995P (97% identity) | M.Hpy280AORFNP | |
| ??? | R | HpyL035ORF5140P (97% identity) | Hpy280AORFNP | |
| ??? | M | M.HpyGE2V (99% identity) | CTNAG | M.Hpy280AORFFP |
| ??? | R | HpyG63ORFKP (99% identity) | CTNAG | Hpy280AORFFP |
| ??? | M | M.HpySW28IV (99% identity) | CCGG | M.Hpy280AORFLP |
| ??? | R | HpyGORF242P (82% identity) | CCGG | Hpy280AORFLP |
| ??? | hypothetical protein | |||
| ??? | 208 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.Hpy381FORFGP (99% identity) | M.Hpy280AORFMP | |
| ??? | M | M.HpyLI13VII (98% identity) | GATC | M.Hpy280AORFGP |
| ??? | R | HpyP010VIIP (98% identity) | GATC | Hpy280AORFGP |
| ??? | M | M.HpyGRE046ORF430P (68% identity) | M1.Hpy280AORFIP | |
| ??? | M | adenine/cytosine DNA methyltransferase | M2.Hpy280AORFIP | |
| ??? | R | HpyL014ORF285P (99% identity) | CCTTC | Hpy280AORFIP |
| ??? | hypothetical protein | |||
| ??? | 419 aa hypothetical protein | |||
| ??? | R | HpyG8GORFGP (99% identity) | GTSAC | Hpy280AORFJP |
| ??? | M | M.HpyN6ORFOP (99% identity) | GTSAC | M.Hpy280AORFJP |
| ??? | restriction endonuclease | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | HpyP002IVP (92% identity) | CCTC | Hpy280AORFKP |
| ??? | DNA methyltransferase | |||
| ??? | M | M2.HpyG004VIIP (98% identity) | CCTC | M2.Hpy280AORFKP |
| ??? | R | HpyGE2ORF7560P (100% identity) | Hpy280AORFHP | |
| ??? | M | M.HpyLI07ORF7820P (98% identity) | M.Hpy280AORFHP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyME40ORF7355P (95% identity) | M.Hpy280AORFC1P | |
| ??? | R | HpyNP02ORF6895P (95% identity) | Hpy280AORFC1P | |
| ??? | R | HpyR3cORF7375P (94% identity) | Hpy280AORFYP | |
| ??? | M | M.HpyIS11ORF6095P (94% identity) | M.Hpy280AORFYP | |
| ??? | hypothetical protein | |||
| ??? | R | Hpy26AEK1ORFPP (96% identity) | Hpy280AORFCP | |
| ??? | M | M.HpyIS10XV (97% identity) | M.Hpy280AORFCP | |