Helicobacter pylori 381-A-EK4 |
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Putative Helicobacter pylori 381-A-EK4 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,579,431 bp
GenBank #: CP032901
REBASE acronym: Hpy381A
Org_num: 34983
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy381FORFDP (100% identity) | M.Hpy381AORFDP | |
| ??? | S | S.Hpy381FORFDP (100% identity) | S.Hpy381AORFDP | |
| ??? | R | Hpy381FORFDP (100% identity) | Hpy381AORFDP | |
| ??? | S | S.Hpy381CORFTP (100% identity) | S.Hpy381AORFUP | |
| ??? | R | Hpy381FORFPP (100% identity) | CCANNNNNNTC | Hpy381AORFNP |
| ??? | M | M.Hpy381FORFPP (100% identity) | CCANNNNNNTC | M.Hpy381AORFNP |
| ??? | S | S.Hpy381FORFPP (100% identity) | CCANNNNNNTC | S.Hpy381AORFNP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hpy381FORFJP (100% identity) | Hpy381AORFD1P | |
| ??? | RM | Hpy381FORFAP (100% identity) | Hpy381AORFAP | |
| ??? | S | S.Hpy381FORFAP (100% identity) | S.Hpy381AORFAP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M1.HpyUM084ORF8285P (95% identity) | M1.Hpy381AORFA1P | |
| ??? | M | M2.Hpy381FORFB1P (100% identity) | M2.Hpy381AORFA1P | |
| ??? | R | Hpy381FORFB1P (100% identity) | GAAGA | Hpy381AORFA1P |
| ??? | hypothetical protein | |||
| ??? | M | M.Hpy381FORFZP (100% identity) | GANTC | M.Hpy381AORFYP |
| ??? | R | Hpy381FORFZP (100% identity) | GANTC | Hpy381AORFYP |
| ??? | RM | Hpy381CORFVP (100% identity) | Hpy381AORFWP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy381FORFBP (100% identity) | Hpy381AORFBP | |
| ??? | M | M.Hpy381FORFBP (100% identity) | M.Hpy381AORFBP | |
| ??? | R | Hpy381FORFWP (100% identity) | CATG | Hpy381AORFVP |
| ??? | M | M.Hpy381FORFWP (100% identity) | CATG | M.Hpy381AORFVP |
| ??? | M | M.Hpy381FORFCP (100% identity) | M.Hpy381AORFCP | |
| ??? | RM | Hpy381CORFSBP (100% identity) | Hpy381AORFTBP | |
| ??? | RM | restriction endonuclease | Hpy381AORFTAP | |
| ??? | R | Hpy381FORFTP (100% identity) | GTAC | Hpy381AORFRP |
| ??? | M | M.Hpy381FORFTP (100% identity) | GTAC | M.Hpy381AORFRP |
| ??? | R | Hpy381FORFQP (100% identity) | Hpy381AORFOP | |
| ??? | M | M.Hpy381FORFQP (100% identity) | M.Hpy381AORFOP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | hypothetical protein | |||
| ??? | R | Hpy381FORFRP (100% identity) | ACNGT | Hpy381AORFPP |
| ??? | M | M.Hpy381FORFRP (100% identity) | M.Hpy381AORFPP | |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy381FORFSP (100% identity) | ATTAAT | M.Hpy381AORFQP |
| ??? | R | Hpy381FORFEP (100% identity) | GTNNAC | Hpy381AORFEP |
| ??? | M | M.Hpy381FORFEP (100% identity) | GTNNAC | M.Hpy381AORFEP |
| ??? | M | M.Hpy381FORFOP (100% identity) | TCNNGA | M.Hpy381AORFMP |
| ??? | R | Hpy381FORFOP (100% identity) | TCNNGA | Hpy381AORFMP |
| ??? | M | M.Hpy381FORFFP (100% identity) | CCGG | M.Hpy381AORFFP |
| ??? | R | Hpy381FORFFP (100% identity) | CCGG | Hpy381AORFFP |
| ??? | DNA -methyltransferase | |||
| ??? | 212 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.Hpy381FORFGP (100% identity) | TCGA | M.Hpy381AORFGP |
| ??? | M | M.Hpy381FORFHP (100% identity) | GATC | M.Hpy381AORFHP |
| ??? | R | Hpy381FORFHP (100% identity) | GATC | Hpy381AORFHP |
| ??? | M | M1.Hpy381CORFJP (100% identity) | M1.Hpy381AORFJP | |
| ??? | M | adenine/cytosine DNA methyltransferase | M2.Hpy381AORFJP | |
| ??? | R | Hpy381FORFLP (100% identity) | Hpy381AORFJP | |
| ??? | 267 aa hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | R | Hpy381FORFMP (100% identity) | GTSAC | Hpy381AORFKP |
| ??? | M | M.Hpy381FORFMP (100% identity) | GTSAC | M.Hpy381AORFKP |
| ??? | hypothetical protein | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy381FORFNP (100% identity) | CCTC | Hpy381AORFLP |
| ??? | M | M2.Hpy381FORFNP (100% identity) | CCTC | M2.Hpy381AORFLP |
| ??? | M | M1.Hpy381FORFNP (100% identity) | CCTC | M1.Hpy381AORFLP |
| ??? | R | Hpy381FORFKP (100% identity) | Hpy381AORFIP | |
| ??? | M | M.HpyLI07ORF7820P (100% identity) | M.Hpy381AORFIP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy381FORFIP (100% identity) | M.Hpy381AORFC1P | |
| ??? | R | Hpy381FORFIP (100% identity) | Hpy381AORFC1P | |
| ??? | R | Hpy381FORFA1P (100% identity) | Hpy381AORFZP | |
| ??? | M | M.Hpy381FORFA1P (100% identity) | M.Hpy381AORFZP | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.Hpy381FORFUP (100% identity) | M.Hpy381AORFSP | |
| ??? | R | Hpy381FORFUP (100% identity) | Hpy381AORFSP | |