Helicobacter pylori 476-A-EK5 |
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Putative Helicobacter pylori 476-A-EK5 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,634,797 bp
GenBank #: CP032900
REBASE acronym: Hpy476A
Org_num: 34986
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyGE21ORF6935P (100% identity) | S.Hpy476AORFCP | |
| ??? | M | M.Hpy476CORFCP (100% identity) | M.Hpy476AORFCP | |
| ??? | S | S.Hpy476CORFWP (99% identity) | S.Hpy476AORFVP | |
| ??? | M | M.Hpy476CORFWP (100% identity) | M.Hpy476AORFVP | |
| ??? | R | Hpy476CORFWP (99% identity) | Hpy476AORFVP | |
| ??? | S | S.HpyK111XI (89% identity) | S.Hpy476AORFQP | |
| ??? | R | Hpy476CORFQP (83% identity) | Hpy476AORFOP | |
| ??? | S | type I restriction enzyme R protein | S1.Hpy476AORFOP | |
| ??? | S | S.Hpy476A2ORFUP (100% identity) | S2.Hpy476AORFOP | |
| ??? | M | M.Hpy476CORFQBP (100% identity) | M.Hpy476AORFOBP | |
| ??? | M | type I restriction-modification system subunit M | M.Hpy476AORFOAP | |
| ??? | DNA cytosine methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy476CORFMP (100% identity) | Hpy476AORFC1P | |
| ??? | RM | type II restriction modification enzyme methyltransferase | Hpy476AORFAP | |
| ??? | S | S1.Hpy476CORFAP (100% identity) | S1.Hpy476AORFAP | |
| ??? | S | S.HpyCA17ORF7480P (46% identity) | S2.Hpy476AORFAP | |
| ??? | R | Hpy476CORFBP (100% identity) | GAATTC | Hpy476AORFBP |
| ??? | M | M.Hpy476CORFBP (100% identity) | GAATTC | M.Hpy476AORFBP |
| ??? | hypothetical protein | |||
| ??? | M | M2.HpyG020X (95% identity) | M.Hpy476AORFZP | |
| ??? | R | 347 aa hypothetical protein | Hpy476AORFZP | |
| ??? | RM | Hpy476CORFXP (99% identity) | Hpy476AORFWP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | M | M.Hpy476CORFYP (100% identity) | M.Hpy476AORFXP | |
| ??? | R | Hpy476CORFYP (100% identity) | Hpy476AORFXP | |
| ??? | R | HpyLI25VIP (100% identity) | Hpy476AORFDP | |
| ??? | M | M.Hpy476CORFDP (100% identity) | M.Hpy476AORFDP | |
| ??? | M | M.Hpy476CORFEP (99% identity) | M.Hpy476AORFEP | |
| ??? | M | M.Hpy476CORFFP (100% identity) | M.Hpy476AORFFP | |
| ??? | M | M.Hpy476CORFTP (100% identity) | ATTAAT | M.Hpy476AORFSP |
| ??? | DNA adenine methylase | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.Hpy476CORFUP (100% identity) | ACNGT | M.Hpy476AORFTP |
| ??? | R | Hpy476CORFUP (100% identity) | ACNGT | Hpy476AORFTP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.Hpy476CORFVP (100% identity) | ACGT | M.Hpy476AORFUP |
| ??? | R | Hpy476CORFVP (100% identity) | ACGT | Hpy476AORFUP |
| ??? | M | M.Hpy476CORFSP (100% identity) | M.Hpy476AORFRP | |
| ??? | R | Hpy476CORFSP (100% identity) | Hpy476AORFRP | |
| ??? | type I restriction-modification system subunit M | |||
| ??? | M | M.HpyT021ORF4100P (100% identity) | M.Hpy476AORFPP | |
| ??? | R | Hpy476CORFRP (100% identity) | Hpy476AORFPP | |
| ??? | R | Hpy476CORFHP (100% identity) | GTNNAC | Hpy476AORFHP |
| ??? | M | M.Hpy476CORFHP (100% identity) | GTNNAC | M.Hpy476AORFHP |
| ??? | M | M.Hpy476CORFPP (100% identity) | M.Hpy476AORFNP | |
| ??? | R | Hpy476CORFPP (100% identity) | Hpy476AORFNP | |
| ??? | M | M.Hpy476CORFIP (100% identity) | CCGG | M.Hpy476AORFIP |
| ??? | R | Hpy476CORFIP (100% identity) | CCGG | Hpy476AORFIP |
| ??? | DNA -methyltransferase | |||
| ??? | endonuclease MjaVIP | |||
| ??? | M | M.Hpy476CORFJP (100% identity) | TCGA | M.Hpy476AORFJP |
| ??? | M | M.Hpy476CORFOP (98% identity) | GATC | M.Hpy476AORFMP |
| ??? | R | Hpy476CORFOP (100% identity) | GATC | Hpy476AORFMP |
| ??? | R | restriction endonuclease | CCTC | Hpy476AORFKP |
| ??? | DNA methyltransferase | |||
| ??? | M | 232 aa hypothetical protein | CCTC | M2.Hpy476AORFKP |
| ??? | R | Hpy476CORFNP (100% identity) | Hpy476AORFLP | |
| ??? | M | M.HpyLI07ORF7820P (100% identity) | M.Hpy476AORFLP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyU008ORF7365P (96% identity) | M.Hpy476AORFB1P | |
| ??? | R | Hpy476CORFLP (100% identity) | Hpy476AORFB1P | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | Hpy476CORFZP (100% identity) | Hpy476AORFYP | |
| ??? | M | M.Hpy476CORFZP (100% identity) | M.Hpy476AORFYP | |
| ??? | hypothetical protein | |||
| ??? | R | Hpy476A2ORFHP (100% identity) | Hpy476AORFGP | |
| ??? | M | M.Hpy476CORFGP (100% identity) | M.Hpy476AORFGP | |