Helicobacter pylori 479-C-EK2 |
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Putative Helicobacter pylori 479-C-EK2 RM systems
Ref: Ailloud,F. et al. unpublished
REBASE ref # 28880
Complete sequence: 1,638,022 bp
GenBank #: CP032898
REBASE acronym: Hpy479C
Org_num: 34991
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DNA cytosine methyltransferase | |||
| ??? | M | M.Hpy479C2ORFYP (96% identity) | M.Hpy479CORFTP | |
| ??? | S | S.Hpy479C2ORFYP (100% identity) | S.Hpy479CORFTP | |
| ??? | R | Hpy479C2ORFYP (100% identity) | Hpy479CORFTP | |
| ??? | S | S.HpyBS272ORF4690P (69% identity) | S.Hpy479CORFRP | |
| ??? | R | Hpy479A2ORFZP (100% identity) | Hpy479CORFLP | |
| ??? | M | M.Hpy479A2ORFZP (97% identity) | M.Hpy479CORFLP | |
| ??? | S | restriction endonuclease subunit S | S.Hpy479CORFLP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hpy479C2ORFMP (99% identity) | Hpy479CORFD1P | |
| ??? | R | Hpy479C2ORFNP (100% identity) | Hpy479CORFB1P | |
| ??? | RM | Hpy479A2ORFOP (100% identity) | Hpy479CORFA1P | |
| ??? | S | S.Hpy479C2ORFPP (97% identity) | S1.Hpy479CORFA1P | |
| ??? | S | S2.HpyNCI16ORFVP (92% identity) | S2.Hpy479CORFA1P | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M.Hpy479C2ORFSP (100% identity) | GAAGA | M.Hpy479CORFZP |
| ??? | R | Hpy479C2ORFSP (100% identity) | GAAGA | Hpy479CORFZP |
| ??? | hypothetical protein | |||
| ??? | M | M.Hpy479C2ORFVP (100% identity) | GANTC | M.Hpy479CORFXP |
| ??? | R | Hpy479C2ORFVP (100% identity) | GANTC | Hpy479CORFXP |
| ??? | RM | HpyH026ORF6555P (87% identity) | Hpy479CORFVP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M.Hpy479C2ORFBP (100% identity) | M.Hpy479CORFBP | |
| ??? | M | M.Hpy479A2ORFCP (100% identity) | M.Hpy479CORFCP | |
| ??? | R | Hpy479C2ORFWP (100% identity) | TCNNGA | Hpy479CORFUP |
| ??? | M | M.Hpy479C2ORFWP (100% identity) | TCNNGA | M.Hpy479CORFUP |
| ??? | M | M.Hpy479C2ORFDP (100% identity) | GTNNAC | M.Hpy479CORFDP |
| ??? | R | Hpy479C2ORFDP (100% identity) | GTNNAC | Hpy479CORFDP |
| ??? | R | Hpy479C2ORFXP (100% identity) | Hpy479CORFSP | |
| ??? | M | M.HpyLI25ORF4045P (100% identity) | M.Hpy479CORFSP | |
| ??? | hypothetical protein | |||
| ??? | RM | Hpy479A2ORFYP (99% identity) | Hpy479CORFQP | |
| ??? | R | Hpy479C2ORFEP (100% identity) | GTAC | Hpy479CORFEP |
| ??? | M | M.Hpy479C2ORFEP (100% identity) | GTAC | M.Hpy479CORFEP |
| ??? | R | Hpy479C2ORFC1P (100% identity) | Hpy479CORFMP | |
| ??? | M | M.Hpy479C2ORFC1P (100% identity) | M.Hpy479CORFMP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | GIY-YIG nuclease family protein | Hpy479CORFNP | |
| ??? | M | M.Hpy479C2ORFD1P (100% identity) | M.Hpy479CORFNP | |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy479C2ORFE1P (100% identity) | ATTAAT | M.Hpy479CORFOP |
| ??? | M | M.Hpy479C2ORFFP (100% identity) | M.Hpy479CORFFP | |
| ??? | M | M.Hpy479C2ORFGP (100% identity) | CCGG | M.Hpy479CORFGP |
| ??? | R | Hpy479C2ORFGP (100% identity) | CCGG | Hpy479CORFGP |
| ??? | DNA -methyltransferase | |||
| ??? | endonuclease MjaVIP | |||
| ??? | M | M.Hpy479C2ORFHP (100% identity) | TCGA | M.Hpy479CORFHP |
| ??? | M | M.Hpy479C2ORFIP (100% identity) | GATC | M.Hpy479CORFIP |
| ??? | R | Hpy479C2ORFIP (100% identity) | GATC | Hpy479CORFIP |
| ??? | R | restriction endonuclease | CCTC | Hpy479CORFJP |
| ??? | DNA methyltransferase | |||
| ??? | M | DNA methyltransferase | CCTC | M2.Hpy479CORFJP |
| ??? | R | Hpy479C2ORFKP (100% identity) | TGCA | Hpy479CORFKP |
| ??? | M | M.Hpy479C2ORFKP (100% identity) | TGCA | M.Hpy479CORFKP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy479C2ORFLP (100% identity) | M.Hpy479CORFC1P | |
| ??? | R | Hpy479C2ORFLP (100% identity) | Hpy479CORFC1P | |
| ??? | R | Hpy479C2ORFAP (99% identity) | Hpy479CORFAP | |
| ??? | M | M.Hpy479C2ORFAP (100% identity) | M.Hpy479CORFAP | |
| ??? | R | HpyP002ORF6550P (92% identity) | Hpy479CORFYP | |
| ??? | M | M.HpyP102XIII (95% identity) | M.Hpy479CORFYP | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.Hpy479A2ORFD1P (99% identity) | M.Hpy479CORFPP | |
| ??? | R | Hpy479C2ORFF1P (100% identity) | Hpy479CORFPP | |