Helicobacter pylori 19-C-EK1 |
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Putative Helicobacter pylori 19-C-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,709,363 bp
GenBank #: CP032480
REBASE acronym: Hpy19C
Org_num: 34973
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy19AORFWP (100% identity) | S.Hpy19CORFVP | |
| ??? | R | Hpy19AORFUP (100% identity) | Hpy19CORFTP | |
| ??? | S | S.Hpy19AORFUP (100% identity) | S.Hpy19CORFTP | |
| ??? | M | type I restriction-modification system subunit M | M.Hpy19CORFTBP | |
| ??? | M | M.Hpy19AORFUAP (100% identity) | M.Hpy19CORFTAP | |
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy19AORFQP (100% identity) | CCANNNNNNTC | Hpy19CORFEP |
| ??? | M | M.Hpy19AORFQP (99% identity) | CCANNNNNNTC | M.Hpy19CORFEP |
| ??? | S | S.Hpy19AORFQP (100% identity) | CCANNNNNNTC | S.Hpy19CORFEP |
| ??? | R | Hpy19AORFJP (100% identity) | Hpy19CORFKP | |
| ??? | M | M.Hpy19AORFJP (100% identity) | M.Hpy19CORFKP | |
| ??? | S | S.Hpy19AORFJP (100% identity) | S.Hpy19CORFKP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hpy19AORFC1P (100% identity) | Hpy19CORFB1P | |
| ??? | R | Hpy19AORFAP (100% identity) | Hpy19CORFAP | |
| ??? | RM | Hpy19AORFA1P (100% identity) | Hpy19CORFZP | |
| ??? | S | S1.Hpy19AORFA1P (100% identity) | S1.Hpy19CORFZP | |
| ??? | S | S2.Hpy19AORFA1P (100% identity) | S2.Hpy19CORFZP | |
| ??? | R | Hpy19AORFZP (95% identity) | CATG | Hpy19CORFYP |
| ??? | M | M.Hpy19AORFZP (100% identity) | CATG | M.Hpy19CORFYP |
| ??? | M | M.Hpy19AORFBP (100% identity) | M.Hpy19CORFBP | |
| ??? | R | Hpy19AORFYP (100% identity) | TCNNGA | Hpy19CORFXP |
| ??? | M | M.Hpy19AORFYP (100% identity) | TCNNGA | M.Hpy19CORFXP |
| ??? | M | M.Hpy19AORFCP (100% identity) | GTNNAC | M.Hpy19CORFCP |
| ??? | R | Hpy19AORFCP (99% identity) | GTNNAC | Hpy19CORFCP |
| ??? | RM | Hpy19AORFXP (100% identity) | Hpy19CORFWP | |
| ??? | R | Hpy19AORFDP (100% identity) | GTAC | Hpy19CORFDP |
| ??? | M | M.Hpy19AORFDP (100% identity) | GTAC | M.Hpy19CORFDP |
| ??? | type I restriction-modification system subunit M | |||
| ??? | M | M.HpyR09ORF4225P (100% identity) | M.Hpy19CORFUP | |
| ??? | R | Hpy19AORFVP (100% identity) | Hpy19CORFUP | |
| ??? | R | Hpy19AORFRP (100% identity) | Hpy19CORFQP | |
| ??? | M | M.Hpy19AORFRP (100% identity) | M.Hpy19CORFQP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy75ORF2360P (100% identity) | ACNGT | Hpy19CORFRP |
| ??? | M | M.HpyLI26II (100% identity) | ACNGT | M.Hpy19CORFRP |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy19AORFTP (100% identity) | ATTAAT | M.Hpy19CORFSP |
| ??? | M | M.Hpy19AORFEP (100% identity) | CCGG | M.Hpy19CORFFP |
| ??? | R | 184 aa hypothetical protein HMPREF1415_00409 | CCGG | Hpy19CORFFP |
| ??? | DNA -methyltransferase | |||
| ??? | 184 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.Hpy19AORFFP (100% identity) | TCGA | M.Hpy19CORFGP |
| ??? | M | M.Hpy19AORFGP (100% identity) | GATC | M.Hpy19CORFHP |
| ??? | R | Hpy19AORFGP (100% identity) | GATC | Hpy19CORFHP |
| ??? | M | M1.Hpy19AORFOP (100% identity) | CCTC | M1.Hpy19CORFOP |
| ??? | DNA methyltransferase | |||
| ??? | DNA methyltransferase | |||
| ??? | R | Hpy19AORFPP (100% identity) | GANTC | Hpy19CORFPP |
| ??? | M | M.Hpy19AORFPP (100% identity) | GANTC | M.Hpy19CORFPP |
| ??? | R | Hpy19AORFMP (100% identity) | GAAGA | Hpy19CORFMP |
| ??? | M | M1.Hpy19AORFMP (100% identity) | GAAGA | M1.Hpy19CORFMP |
| ??? | M | M2.Hpyfe83ORF6950P (95% identity) | GAAGA | M2.Hpy19CORFMP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | adenosine deaminase | M.Hpy19CORFLP | |
| ??? | R | Hpy19AORFIP (100% identity) | TGCA | Hpy19CORFJP |
| ??? | M | M.Hpy19AORFIP (100% identity) | TGCA | M.Hpy19CORFJP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy19AORFB1P (100% identity) | M.Hpy19CORFA1P | |
| ??? | R | Hpy19AORFB1P (100% identity) | Hpy19CORFA1P | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.Hpy19AORFNP (100% identity) | M.Hpy19CORFNP | |
| ??? | R | Hpy19AORFNP (100% identity) | Hpy19CORFNP | |
| ??? | M | M.Hpy19AORFHP (100% identity) | M.Hpy19CORFIP | |
| ??? | R | Hpy19AORFHP (98% identity) | Hpy19CORFIP | |