Helicobacter pylori 169-C-EK8 |
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Putative Helicobacter pylori 169-C-EK8 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,611,628 bp
GenBank #: CP032477
REBASE acronym: Hpy169C
Org_num: 34970
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy169AORFPP (100% identity) | S.Hpy169CORFPP | |
| ??? | M | M.Hpy169AORFPP (100% identity) | M.Hpy169CORFPP | |
| ??? | R | HpyPOR113ORF2140P (88% identity) | Hpy169CORFPP | |
| ??? | S | S.Hpy169AORFKP (100% identity) | S.Hpy169CORFKP | |
| ??? | R | Hpy169AORFJP (100% identity) | Hpy169CORFJP | |
| ??? | S | S.Hpy169AORFJP (100% identity) | S.Hpy169CORFJP | |
| ??? | M | M.Hpy169AORFJP (100% identity) | M.Hpy169CORFJP | |
| ??? | R | HsdR family type I site-specific deoxyribonuclease | Hpy169CORFGP | |
| ??? | M | M.Hpy169AORFGP (100% identity) | M.Hpy169CORFGP | |
| ??? | S | S.Hpy169AORFGP (100% identity) | S.Hpy169CORFGP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy169AORFYP (100% identity) | Hpy169CORFXP | |
| ??? | R | Hpy169AORFAP (100% identity) | CCATC | Hpy169CORFAP |
| ??? | M | M2.Hpy169AORFAP (100% identity) | CCATC | M2.Hpy169CORFAP |
| ??? | M | M1.Hpy169AORFAP (100% identity) | CCATC | M1.Hpy169CORFAP |
| ??? | R | HpySW33ORF1320P (100% identity) | Hpy169CORFRP | |
| ??? | M | M.Hpy169AORFVP (100% identity) | M.Hpy169CORFRP | |
| ??? | R | Hpy169AORFTP (100% identity) | GAATTC | Hpy169CORFVP |
| ??? | M | M.Hpy169AORFTP (100% identity) | GAATTC | M.Hpy169CORFVP |
| ??? | M | M.Hpy169AORFSP (100% identity) | TGCA | M.Hpy169CORFTP |
| ??? | R | Hpy169AORFSP (100% identity) | TGCA | Hpy169CORFTP |
| ??? | M | M1.Hpy169AORFQP (100% identity) | CCTC | M1.Hpy169CORFQP |
| ??? | M | M2.Hpy169AORFQP (99% identity) | M2.Hpy169CORFQP | |
| ??? | R | Hpy169AORFBP (100% identity) | GATC | Hpy169CORFBP |
| ??? | M | M.Hpy169AORFBP (100% identity) | GATC | M.Hpy169CORFBP |
| ??? | R | Hpy169AORFCP (100% identity) | CCGG | Hpy169CORFCP |
| ??? | M | M.Hpy169AORFCP (100% identity) | CCGG | M.Hpy169CORFCP |
| ??? | M | M.Hpy169AORFNP (100% identity) | ATTAAT | M.Hpy169CORFNP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.Hpy169AORFOP (100% identity) | M.Hpy169CORFOP | |
| ??? | R | Hpy169AORFOP (100% identity) | Hpy169CORFOP | |
| ??? | RM | Hpy169AORFLAP (100% identity) | Hpy169CORFLAP | |
| ??? | RM | DEAD/DEAH box helicase | Hpy169CORFLBP | |
| ??? | R | Hpy169AORFDP (100% identity) | GTNNAC | Hpy169CORFDP |
| ??? | M | M.Hpy169AORFDP (100% identity) | GTNNAC | M.Hpy169CORFDP |
| ??? | M | M.Hpy169AORFIP (100% identity) | TCNNGA | M.Hpy169CORFIP |
| ??? | R | HpyL035ORF5140P (100% identity) | TCNNGA | Hpy169CORFIP |
| ??? | M | M.Hpy169AORFEP (100% identity) | M.Hpy169CORFEP | |
| ??? | M | M.Hpy169AORFFP (99% identity) | CATG | M.Hpy169CORFFP |
| ??? | RM | Hpy169AORFHP (100% identity) | Hpy169CORFHP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy169AORFXP (99% identity) | M.Hpy169CORFWP | |
| ??? | R | Hpy169AORFXP (100% identity) | Hpy169CORFWP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | Hpy169AORFUP (98% identity) | Hpy169CORFUP | |
| ??? | M | M.Hpy169AORFUP (100% identity) | M.Hpy169CORFUP | |
| ??? | R | Hpy169AORFRP (100% identity) | Hpy169CORFSP | |
| ??? | M | M.Hpy169AORFRP (100% identity) | M.Hpy169CORFSP | |
| ??? | R | Hpy169AORFMP (100% identity) | Hpy169CORFMP | |
| ??? | M | M.Hpy169AORFMP (91% identity) | M.Hpy169CORFMP | |