Helicobacter pylori 381-C-EK1 |
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Putative Helicobacter pylori 381-C-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,588,985 bp
GenBank #: CP032476
REBASE acronym: Hpy381C
Org_num: 34984
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy381FORFPP (100% identity) | CCANNNNNNTC | S.Hpy381CORFB1P |
| ??? | M | M.Hpy381FORFPP (100% identity) | CCANNNNNNTC | M.Hpy381CORFB1P |
| ??? | R | Hpy381FORFPP (100% identity) | CCANNNNNNTC | Hpy381CORFB1P |
| ??? | M | M.Hpy381FORFDP (100% identity) | M.Hpy381CORFEP | |
| ??? | S | S.Hpy381FORFDP (100% identity) | S.Hpy381CORFEP | |
| ??? | R | Hpy381FORFDP (100% identity) | Hpy381CORFEP | |
| ??? | S | S.Hpy381AORFUP (100% identity) | S.Hpy381CORFTP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy381FORFAP (100% identity) | S.Hpy381CORFAP | |
| ??? | RM | Hpy381FORFAP (100% identity) | Hpy381CORFAP | |
| ??? | RM | Hpy381FORFJP (100% identity) | Hpy381CORFC1P | |
| ??? | M | M.Hpy381FORFEP (100% identity) | GTNNAC | M.Hpy381CORFBP |
| ??? | R | Hpy381FORFEP (100% identity) | GTNNAC | Hpy381CORFBP |
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.Hpy381FORFRP (100% identity) | M.Hpy381CORFZP | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.Hpy381FORFSP (100% identity) | ATTAAT | M.Hpy381CORFYP |
| ??? | DNA adenine methylase | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M1.HpyUM084ORF8285P (95% identity) | M1.Hpy381CORFA1P | |
| ??? | M | M2.Hpy381FORFB1P (100% identity) | M2.Hpy381CORFA1P | |
| ??? | R | Hpy381FORFB1P (100% identity) | GAAGA | Hpy381CORFA1P |
| ??? | hypothetical protein | |||
| ??? | M | M.Hpy381FORFZP (100% identity) | GANTC | M.Hpy381CORFXP |
| ??? | R | Hpy381FORFZP (100% identity) | GANTC | Hpy381CORFXP |
| ??? | RM | Hpy381AORFWP (100% identity) | Hpy381CORFVP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy381FORFBP (100% identity) | Hpy381CORFCP | |
| ??? | M | M.Hpy381FORFBP (100% identity) | M.Hpy381CORFCP | |
| ??? | R | Hpy381FORFWP (100% identity) | CATG | Hpy381CORFUP |
| ??? | M | M.Hpy381FORFWP (100% identity) | CATG | M.Hpy381CORFUP |
| ??? | M | M.Hpy381FORFCP (100% identity) | M.Hpy381CORFDP | |
| ??? | RM | Hpy381AORFTBP (100% identity) | Hpy381CORFSBP | |
| ??? | RM | restriction endonuclease | Hpy381CORFSAP | |
| ??? | R | Hpy381FORFTP (100% identity) | GTAC | Hpy381CORFQP |
| ??? | M | M.Hpy381FORFTP (100% identity) | GTAC | M.Hpy381CORFQP |
| ??? | R | Hpy381FORFQP (100% identity) | Hpy381CORFNP | |
| ??? | M | M.Hpy381FORFQP (100% identity) | M.Hpy381CORFNP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | hypothetical protein | |||
| ??? | R | Hpy381FORFRP (100% identity) | ACNGT | Hpy381CORFOP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M.Hpy381FORFOP (100% identity) | TCNNGA | M.Hpy381CORFMP |
| ??? | R | Hpy381FORFOP (100% identity) | TCNNGA | Hpy381CORFMP |
| ??? | M | M.Hpy381FORFFP (100% identity) | CCGG | M.Hpy381CORFFP |
| ??? | R | Hpy381FORFFP (100% identity) | CCGG | Hpy381CORFFP |
| ??? | DNA -methyltransferase | |||
| ??? | 212 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.Hpy381FORFGP (100% identity) | TCGA | M.Hpy381CORFGP |
| ??? | M | M.Hpy381FORFHP (100% identity) | GATC | M.Hpy381CORFHP |
| ??? | R | Hpy381FORFHP (100% identity) | GATC | Hpy381CORFHP |
| ??? | M | M1.Hpy381AORFJP (100% identity) | M1.Hpy381CORFJP | |
| ??? | M | adenine/cytosine DNA methyltransferase | M2.Hpy381CORFJP | |
| ??? | R | Hpy381FORFLP (100% identity) | Hpy381CORFJP | |
| ??? | 267 aa hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | R | Hpy381FORFMP (100% identity) | GTSAC | Hpy381CORFKP |
| ??? | M | M.Hpy381FORFMP (100% identity) | GTSAC | M.Hpy381CORFKP |
| ??? | hypothetical protein | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy381FORFNP (100% identity) | CCTC | Hpy381CORFLP |
| ??? | M | M2.Hpy381FORFNP (100% identity) | CCTC | M2.Hpy381CORFLP |
| ??? | M | M1.Hpy381FORFNP (100% identity) | CCTC | M1.Hpy381CORFLP |
| ??? | R | Hpy381FORFKP (100% identity) | Hpy381CORFIP | |
| ??? | M | M.HpyLI07ORF7820P (100% identity) | M.Hpy381CORFIP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpy381FORFIP (100% identity) | Hpy381CORFD1P | |
| ??? | M | M.Hpy381FORFIP (93% identity) | M.Hpy381CORFD1P | |
| ??? | M | M.Hpy381FORFUP (87% identity) | M.Hpy381CORFRP | |
| ??? | R | Hpy381FORFUP (100% identity) | Hpy381CORFRP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.Hpy381FORFA1P (69% identity) | M.Hpy381CORFPP | |
| ??? | R | Hpy381FORFA1P (100% identity) | Hpy381CORFPP | |