Escherichia fergusonii EFCF056 |
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Putative Escherichia fergusonii EFCF056 RM systems
Ref: Tang,B. unpublished
REBASE ref # 28861
| Sequence length: | GenBank #: | |
| Chromosome: | 4,576,669 bp | CP040805 |
| plasmid pEF01: | 204,246 bp | CP040806 |
| plasmid pEF02: | 90,871 bp | CP040807 |
| plasmid pEF03: | 80,801 bp | CP040808 |
| plasmid pEF06: | 67,036 bp | CP040811 |
REBASE acronym: Efe56
Org_num: 34925
All begin D8Z79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3180 | endoribonuclease SymE | |||
| 3185 | S | S.Efe44C01ORF18310P (99% identity) | S.Efe56ORF3190P | |
| 3190 | M | M.SspS13ORF3945P (99% identity) | M.Efe56ORF3190P | |
| 3195 | R | EcosLF82ORF3455P (99% identity) | Efe56ORF3190P | |
| 3200 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.EfeTDamP (100% identity) | M.Efe56DamP | |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 domain-containing protein | |||
| 2385 | M | M.EfeTORF37040P (99% identity) | M.Efe56ORF2385P | |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 3115 | DEAD/DEAH box helicase | |||
| 3120 | RM | KpnB86ORF26160P (90% identity) | Efe56ORF3120P | |
| 4735 | helix-turn-helix transcriptional regulator | |||
| 4740 | R | EcoC09ORF10175P (99% identity) | GCWGC | Efe56ORF4740P |
| 4745 | DUF4102 domain-containing protein | |||
| 8205 | recombination protein NinB | |||
| 8210 | M | M.Eco2533ORFLP (85% identity) | GATC | M.Efe56ORF8210P |
| 8215 | IS110 family transposase | |||
| 20355 | glyoxylate bypass operon transcriptional | |||
| 20360 | M | M.EfeTORF2210P (100% identity) | M.Efe56ORF20360P | |
| 20365 | bifunctional isocitrate dehydrogenase | |||
| plasmid pEF01 | ||||
| 22365 | thermonuclease family protein | |||
| 22370 | M | M.YpsF1ORFCP (100% identity) | M.Efe56ORF22370P | |
| 22375 | DUF1173 domain-containing protein | |||
| 23125 | 284 aa hypothetical protein | |||
| 23130 | M | M.YpsF1ORFDP (100% identity) | M.Efe56ORF23130P | |
| 23135 | DNA-binding protein | |||
| 23280 | 202 aa hypothetical protein | |||
| 23285 | M | M.YpsF1ORFBP (100% identity) | M.Efe56ORF23285P | |
| 23290 | 108 aa hypothetical protein | |||
| plasmid pEF02 | ||||
| 24040 | 73 aa hypothetical protein | |||
| 24045 | M | M.Xca80ORFEP (100% identity) | M.Efe56ORF24045P | |
| 24050 | 59 aa hypothetical protein | |||
| plasmid pEF03 | ||||
| 24375 | 73 aa hypothetical protein | |||
| 24380 | M | M.SspPIBORF23080P (100% identity) | M.Efe56ORF24380P | |
| 24385 | 0 aa hypothetical protein | |||
| plasmid pEF06 | ||||
| 25880 | SWF/SNF helicase family protein | |||
| 25885 | M | M.EmeG4120ORF9095P (26% identity) | M.Efe56ORF25885P | |
| 25890 | 59 aa hypothetical protein | |||