Salmonella enterica subsp. enterica serovar Agona USDA-ARS-USMARC-76334 |
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Putative Salmonella enterica subsp. enterica serovar Agona USDA-ARS-USMARC-76334 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 29022
| Sequence length: | GenBank #: | |
| Chromosome: | 4,762,732 bp | CP025454 |
| plasmid pSAG-76334: | 96,532 bp | CP025455 |
REBASE acronym: Sen76334
Org_num: 35657
All begin CYL23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23655 | toll/interleukin-1 receptor domain-containing | |||
| 23660 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen76334ORF23660P |
| 23665 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen76334ORF23660P |
| 23670 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen76334ORF23660P |
| 23675 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen76334ORF23660P |
| 23680 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5505 | phosphohydrolase | |||
| 5510 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen76334DcmP |
| 5515 | V | V.StyUK1DcmP (100% identity) | V.Sen76334DcmP | |
| 5520 | drug/metabolite exporter YedA | |||
| 14085 | phage portal protein | |||
| 14090 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen76334ORF14095P |
| 14095 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen76334ORF14095P |
| 14100 | 62 aa hypothetical protein | |||
| 14110 | replication endonuclease | |||
| 14115 | M | M.SenSH7ORF6070P (100% identity) | M.Sen76334ORF14115P | |
| 14120 | 75 aa hypothetical protein | |||
| 17610 | Fis family transcriptional regulator | |||
| 17615 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen76334ORF17615P |
| 17620 | DUF2556 domain-containing protein | |||
| 18130 | ribulose-phosphate 3-epimerase | |||
| 18135 | M | M.StyTDamP (100% identity) | GATC | M.Sen76334DamP |
| 18140 | cell division protein DamX | |||
| 23590 | 97 aa hypothetical protein | |||
| 23595 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen76334ORF23595P |
| 23600 | DUF87 domain-containing protein | |||
| plasmid pSAG-76334 | ||||
| 24370 | 101 aa hypothetical protein | |||
| 24375 | M | M.Sfl712783ORFFP (100% identity) | M.Sen76334ORF24375P | |
| 24380 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | MFS transporter | |||
| 1860 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen76334ORF1860P |
| 1865 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen76334ORF1860P |
| 1870 | 33 aa hypothetical protein | |||